James D Malley
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Explore the profile of James D Malley including associated specialties, affiliations and a list of published articles.
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41
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1418
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Recent Articles
1.
Musolf A, Holzinger E, Malley J, Bailey-Wilson J
Hum Genet
. 2021 Dec;
141(9):1515-1528.
PMID: 34862561
Genetic data have become increasingly complex within the past decade, leading researchers to pursue increasingly complex questions, such as those involving epistatic interactions and protein prediction. Traditional methods are ill-suited...
2.
Frederickson S, Steinmiller M, Blaylock T, Wisnieski M, Malley J, Pandolfo L, et al.
J Am Assoc Lab Anim Sci
. 2021 Mar;
60(3):298-305.
PMID: 33653438
Over the past 2 decades, zebrafish, , have become a mainstream laboratory animal model, yet zebrafish husbandry practices remain far from standardized. Feeding protocols play a critical role in the...
3.
Li J, Malley J, Andrew A, Karagas M, Moore J
BioData Min
. 2016 Apr;
9:14.
PMID: 27053949
Background: Identifying gene-gene interactions is essential to understand disease susceptibility and to detect genetic architectures underlying complex diseases. Here, we aimed at developing a permutation-based methodology relying on a machine...
4.
Szymczak S, Holzinger E, Dasgupta A, Malley J, Molloy A, Mills J, et al.
BioData Min
. 2016 Feb;
9:7.
PMID: 26839594
Background: Machine learning methods and in particular random forests (RFs) are a promising alternative to standard single SNP analyses in genome-wide association studies (GWAS). RFs provide variable importance measures (VIMs)...
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Ishwaran H, Malley J
BioData Min
. 2015 Jan;
7(1):28.
PMID: 25614764
Background: Using a collection of different terminal nodesize constructed random forests, each generating a synthetic feature, a synthetic random forest is defined as a kind of hyperforest, calculated using the...
7.
Malley J, Fine A
Phys Lett A
. 2014 Sep;
378(35):2611-2613.
PMID: 25197159
We show that a reduced form of the structural requirements for deterministic hidden variables used in Bell-Kochen-Specker theorems is already sufficient for the no-go results. Those requirements are captured by...
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Greenstein D, Kataria R, Gochman P, Dasgupta A, Malley J, Rapoport J, et al.
J Child Adolesc Psychopharmacol
. 2014 Jul;
24(7):366-73.
PMID: 25019955
Objective: Among children <13 years of age with persistent psychosis and contemporaneous decline in functioning, it is often difficult to determine if the diagnosis of childhood onset schizophrenia (COS) is...