James C Schnable
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Explore the profile of James C Schnable including associated specialties, affiliations and a list of published articles.
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127
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3054
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Recent Articles
1.
Singh A, Newton L, Schnable J, Thompson A
J Exp Bot
. 2025 Jan;
PMID: 39798149
Sorghum is emerging as an ideal genetic model for designing high-biomass bioenergy crops. Biomass yield, a complex trait influenced by various plant architectural characteristics, is typically regulated by numerous genes....
2.
Powadi A, Jubery T, Tross M, Schnable J, Ganapathysubramanian B
Front Plant Sci
. 2025 Jan;
15:1476070.
PMID: 39741666
In plant breeding and genetics, predictive models traditionally rely on compact representations of high-dimensional data, often using methods like Principal Component Analysis (PCA) and, more recently, Autoencoders (AE). However, these...
3.
Torres-Rodriguez J, Li D, Schnable J
Curr Opin Plant Biol
. 2024 Dec;
83:102670.
PMID: 39626491
Transcriptome-wide association studies (TWAS) complement genome-wide association studies (GWAS) by using gene expression data to link specific genes to phenotypes. This review examines 37 TWAS studies across eight plant species,...
4.
Wei J, Guo T, Mu Q, Alladassi B, Mural R, Boyles R, et al.
Plant Cell Environ
. 2024 Oct;
48(4):2727-2738.
PMID: 39415476
Phenotypic plasticity is the property of a genotype to produce different phenotypes under different environmental conditions. Understanding genetic and environmental factors behind phenotypic plasticity helps answer some longstanding biology questions...
5.
Dias H, de Toledo N, Mural R, Schnable J, Van Sluys M
Genome Biol Evol
. 2024 Oct;
16(10).
PMID: 39400049
Molecular evolution analysis typically involves identifying selection pressure and reconstructing evolutionary trends. This process usually requires access to specific data related to a target gene or gene family within a...
6.
Delen Y, Mural R, Palali-Delen S, Xu G, Schnable J, Dweikat I, et al.
Plant Direct
. 2024 Oct;
8(10):e70010.
PMID: 39385760
Sunflower ( L.) plays an essential role in meeting the demand for edible oil worldwide. The yield of sunflower seeds encompasses several component traits, including the disc diameter. Over three...
7.
Sahay S, Shrestha N, Dias H, Mural R, Grzybowski M, Schnable J, et al.
Plant J
. 2024 Aug;
119(6):3000-3014.
PMID: 39126284
Photosynthetic organisms must cope with rapid fluctuations in light intensity. Nonphotochemical quenching (NPQ) enables the dissipation of excess light energy as heat under high light conditions, whereas its relaxation under...
8.
Korth N, Yang Q, Van Haute M, Tross M, Peng B, Shrestha N, et al.
G3 (Bethesda)
. 2024 Jul;
14(9).
PMID: 38979923
Substantial functional metabolic diversity exists within species of cultivated grain crops that directly or indirectly provide more than half of all calories consumed by humans around the globe. While such...
9.
Khound R, Rajput S, Schnable J, Vetriventhan M, Santra D
Planta
. 2024 Jul;
260(2):44.
PMID: 38963439
The pilot-scale genome-wide association study in the US proso millet identified twenty marker-trait associations for five morpho-agronomic traits identifying genomic regions for future studies (e.g. molecular breeding and map-based cloning)....
10.
Li D, Wang Q, Tian Y, Lyv X, Zhang H, Hong H, et al.
Plant Commun
. 2024 Jun;
5(10):101010.
PMID: 38918950
A genome-wide association study (GWAS) identifies trait-associated loci, but identifying the causal genes can be a bottleneck, due in part to slow decay of linkage disequilibrium (LD). A transcriptome-wide association...