Ilene Karsch-Mizrachi
Overview
Explore the profile of Ilene Karsch-Mizrachi including associated specialties, affiliations and a list of published articles.
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59
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9714
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Recent Articles
1.
Sayers E, Cavanaugh M, Frisse L, Pruitt K, Schneider V, Underwood B, et al.
Nucleic Acids Res
. 2024 Nov;
53(D1):D56-D61.
PMID: 39558184
GenBank® (https://www.ncbi.nlm.nih.gov/genbank/) is a comprehensive, public data repository that contains 34 trillion base pairs from over 4.7 billion nucleotide sequences for 581 000 formally described species. Daily data exchange with...
2.
The international nucleotide sequence database collaboration (INSDC): enhancing global participation
Karsch-Mizrachi I, Arita M, Burdett T, Cochrane G, Nakamura Y, Pruitt K, et al.
Nucleic Acids Res
. 2024 Nov;
53(D1):D62-D66.
PMID: 39535044
The members of the International Nucleotide Sequence Database Collaboration (INSDC; https://insdc.org) have built systems to collect, archive and disseminate sequence data for more than four decades. The three collaborating organizations,...
3.
Griffiths E, Mendes I, Maguire F, Guthrie J, Wee B, Schmedes S, et al.
Microb Genom
. 2024 Jun;
10(6).
PMID: 38860884
As public health laboratories expand their genomic sequencing and bioinformatics capacity for the surveillance of different pathogens, labs must carry out robust validation, training, and optimization of wet- and dry-lab...
4.
Timme R, Karsch-Mizrachi I, Waheed Z, Arita M, MacCannell D, Maguire F, et al.
Microb Genom
. 2023 Dec;
9(12).
PMID: 38085797
Fast, efficient public health actions require well-organized and coordinated systems that can supply timely and accurate knowledge. Public databases of pathogen genomic data, such as the International Nucleotide Sequence Database...
5.
Sayers E, Cavanaugh M, Clark K, Pruitt K, Sherry S, Yankie L, et al.
Nucleic Acids Res
. 2023 Oct;
52(D1):D134-D137.
PMID: 37889039
GenBank® (https://www.ncbi.nlm.nih.gov/genbank/) is a comprehensive, public database that contains 25 trillion base pairs from over 3.7 billion nucleotide sequences for 557 000 formally described species. Daily data exchange with the...
6.
Adriaenssens E, Roux S, Brister J, Karsch-Mizrachi I, Kuhn J, Varsani A, et al.
Nat Biotechnol
. 2023 Aug;
41(9):1346.
PMID: 37608068
No abstract available.
7.
Adriaenssens E, Roux S, Brister J, Karsch-Mizrachi I, Kuhn J, Varsani A, et al.
Nat Biotechnol
. 2023 Jul;
41(7):898-902.
PMID: 37430074
No abstract available.
8.
Sayers E, Cavanaugh M, Clark K, Pruitt K, Sherry S, Yankie L, et al.
Nucleic Acids Res
. 2022 Nov;
51(D1):D141-D144.
PMID: 36350640
GenBank® (https://www.ncbi.nlm.nih.gov/genbank/) is a comprehensive, public database that contains 19.6 trillion base pairs from over 2.9 billion nucleotide sequences for 504 000 formally described species. Daily data exchange with the...
9.
Underwood B, Yankie L, Nawrocki E, Palanigobu V, Gotvyanskyy S, Calhoun V, et al.
Database (Oxford)
. 2022 Mar;
2022.
PMID: 35230423
Rapid response to the current coronavirus disease 2019 (COVID-19) pandemic requires fast dissemination of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genomic sequence data in order to align diagnostic tests...
10.
Scholz A, Freitag J, Lyal C, Sara R, Cepeda M, Cancio I, et al.
Nat Commun
. 2022 Feb;
13(1):1086.
PMID: 35197464
No abstract available.