Hiroyo Nishide
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Explore the profile of Hiroyo Nishide including associated specialties, affiliations and a list of published articles.
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Articles
18
Citations
460
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Recent Articles
11.
Handa Y, Nishide H, Takeda N, Suzuki Y, Kawaguchi M, Saito K
Plant Cell Physiol
. 2015 May;
56(8):1490-511.
PMID: 26009592
Gene expression during arbuscular mycorrhizal development is highly orchestrated in both plants and arbuscular mycorrhizal fungi. To elucidate the gene expression profiles of the symbiotic association, we performed a digital...
12.
Chiba H, Nishide H, Uchiyama I
PLoS One
. 2015 Apr;
10(4):e0122802.
PMID: 25875762
Recently, various types of biological data, including genomic sequences, have been rapidly accumulating. To discover biological knowledge from such growing heterogeneous data, a flexible framework for data integration is necessary....
13.
Abe R, Toyota K, Miyakawa H, Watanabe H, Oka T, Miyagawa S, et al.
Aquat Toxicol
. 2014 Dec;
159:44-51.
PMID: 25506888
Juvenile hormone (JH) and JH agonists have been reported to induce male offspring production in various daphnid species including Daphnia magna. We recently established a short-term in vivo screening assay...
14.
Uchiyama I, Mihara M, Nishide H, Chiba H
Nucleic Acids Res
. 2014 Nov;
43(Database issue):D270-6.
PMID: 25398900
The microbial genome database for comparative analysis (MBGD) (available at http://mbgd.genome.ad.jp/) is a comprehensive ortholog database for flexible comparative analysis of microbial genomes, where the users are allowed to create...
15.
Katayama T, Wilkinson M, Aoki-Kinoshita K, Kawashima S, Yamamoto Y, Yamaguchi A, et al.
J Biomed Semantics
. 2014 Feb;
5(1):5.
PMID: 24495517
The application of semantic technologies to the integration of biological data and the interoperability of bioinformatics analysis and visualization tools has been the common theme of a series of annual...
16.
Toyota K, Kato Y, Miyakawa H, Yatsu R, Mizutani T, Ogino Y, et al.
J Appl Toxicol
. 2013 Sep;
34(5):537-44.
PMID: 24038158
Daphnia magna has been used extensively to evaluate organism- and population-level responses to pollutants in acute toxicity and reproductive toxicity tests. We have previously reported that exposure to juvenile hormone...
17.
Uchiyama I, Mihara M, Nishide H, Chiba H
Nucleic Acids Res
. 2012 Nov;
41(Database issue):D631-5.
PMID: 23118485
The microbial genome database for comparative analysis (MBGD, available at http://mbgd.genome.ad.jp/) is a platform for microbial genome comparison based on orthology analysis. As its unique feature, MBGD allows users to...
18.
Watanabe H, Tatarazako N, Oda S, Nishide H, Uchiyama I, Morita M, et al.
Genome
. 2005 Aug;
48(4):606-9.
PMID: 16094427
To study gene expression in the water flea Daphnia magna we constructed a cDNA library and characterized the expressed sequence tags (ESTs) of 7210 clones. The EST sequences clustered into...
19.
Nishiyama T, Fujita T, Shin-I T, Seki M, Nishide H, Uchiyama I, et al.
Proc Natl Acad Sci U S A
. 2003 Jun;
100(13):8007-12.
PMID: 12808149
The mosses and flowering plants diverged >400 million years ago. The mosses have haploid-dominant life cycles, whereas the flowering plants are diploid-dominant. The common ancestors of land plants have been...