Haruko Takeda
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Explore the profile of Haruko Takeda including associated specialties, affiliations and a list of published articles.
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24
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1013
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Recent Articles
1.
Yuan C, Gillon A, Gualdron Duarte J, Takeda H, Coppieters W, Georges M, et al.
Genet Sel Evol
. 2025 Mar;
57(1):10.
PMID: 40038647
Background: The availability of large cohorts of whole-genome sequenced individuals, combined with functional annotation, is expected to provide opportunities to improve the accuracy of genomic selection (GS). However, such benefits...
2.
Yuan C, Gualdron Duarte J, Takeda H, Georges M, Druet T
BMC Genomics
. 2024 Jul;
25(1):690.
PMID: 39003468
Background: Heritability partitioning approaches estimate the contribution of different functional classes, such as coding or regulatory variants, to the genetic variance. This information allows a better understanding of the genetic...
3.
Gualdron Duarte J, Yuan C, Gori A, Moreira G, Takeda H, Coppieters W, et al.
Genet Sel Evol
. 2023 Nov;
55(1):83.
PMID: 38017417
Background: Cohorts of individuals that have been genotyped and phenotyped for genomic selection programs offer the opportunity to better understand genetic variation associated with complex traits. Here, we performed an...
4.
Yuan C, Tang L, Lopdell T, Petrov V, Oget-Ebrad C, Moreira G, et al.
Genome Res
. 2023 Sep;
33(10):1848-1864.
PMID: 37751945
We report the generation of an organism-wide catalog of 976,813 -acting regulatory elements for the bovine detected by the assay for transposase accessible chromatin using sequencing (ATAC-seq). We regroup these...
5.
Lee Y, Bosse M, Takeda H, Moreira G, Karim L, Druet T, et al.
BMC Genomics
. 2023 May;
24(1):225.
PMID: 37127590
Background: Structural variants (SVs) are chromosomal segments that differ between genomes, such as deletions, duplications, insertions, inversions and translocations. The genomics revolution enabled the discovery of sub-microscopic SVs via array...
6.
Georges A, Lavergne A, Mandai M, Lepiemme F, Karim L, Demeulenaere L, et al.
Sci Rep
. 2023 Jan;
13(1):1223.
PMID: 36681719
We report the generation and analysis of single-cell RNA-Seq data (> 38,000 cells) from mouse native retinae and induced pluripotent stem cell (iPSC)-derived retinal organoids at four matched stages of...
7.
Lee Y, Takeda H, Moreira G, Karim L, Mullaart E, Coppieters W, et al.
PLoS Genet
. 2021 Jul;
17(7):e1009331.
PMID: 34288907
Clinical mastitis (CM) is an inflammatory disease occurring in the mammary glands of lactating cows. CM is under genetic control, and a prominent CM resistance QTL located on chromosome 6...
8.
Cheng Z, Buggiotti L, Salavati M, Marchitelli C, Palma-Vera S, Wylie A, et al.
Mol Biol Rep
. 2021 Jun;
48(5):4611-4623.
PMID: 34146201
Bovine mastitis, an inflammatory disease of the mammary gland, is classified as subclinical or clinical. Circulating neutrophils are recruited to the udder to combat infection. We compared the transcriptomic profiles...
9.
Zhang H, Kamiya N, Tsuji T, Takeda H, Scott G, Rajderkar S, et al.
PLoS Genet
. 2016 Dec;
12(12):e1006510.
PMID: 28027321
Ellis-van Creveld (EvC) syndrome is a skeletal dysplasia, characterized by short limbs, postaxial polydactyly, and dental abnormalities. EvC syndrome is also categorized as a ciliopathy because of ciliary localization of...
10.
Badri M, Zhang H, Ohyama Y, Venkitapathi S, Alamoudi A, Kamiya N, et al.
Arch Oral Biol
. 2016 May;
68:142-52.
PMID: 27164562
Objective: Our objectives were to determine the expression of EVC2 in craniofacial tissues and investigate the effect of Evc2 deficiency on craniofacial bones using Evc2 knockout (KO) mouse model. Design:...