Guangrun Yu
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Explore the profile of Guangrun Yu including associated specialties, affiliations and a list of published articles.
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10
Citations
46
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Recent Articles
1.
Yan H, Han J, Jin S, Han Z, Si Z, Yan S, et al.
Nat Genet
. 2025 Mar;
PMID: 40033059
Upland cotton (Gossypium hirsutum) accounts for more than 90% of the world's cotton production and, as an allotetraploid, is a model plant for polyploid crop domestication. In the present study,...
2.
Yu G, Zhang B, Chen Q, Huang Z, Zhang B, Wang K, et al.
Genomics
. 2024 May;
116(4):110871.
PMID: 38806102
Cassava, a crucial tropical crop, faces challenges from cold stress, necessitating an exploration of its molecular response. Here, we investigated the role of DNA methylation in moderating the response to...
3.
Yu G, Chen D, Ye M, Wu X, Zhu Z, Shen Y, et al.
J Exp Bot
. 2024 Feb;
75(10):3040-3053.
PMID: 38310636
Sugarcane (Saccharum spp.), a leading sugar and energy crop, is seriously impacted by drought stress. However, the molecular mechanisms underlying sugarcane drought resistance, especially the functions of epigenetic regulators, remain...
4.
Zhu Z, Dai Y, Yu G, Zhang X, Chen Q, Kou X, et al.
BMC Genomics
. 2023 Dec;
24(1):726.
PMID: 38041011
Background: Pre-exposing plants to abiotic stresses can induce stress memory, which is crucial for adapting to subsequent stress exposure. Although numerous genes involved in salt stress response have been identified,...
5.
Yu G, Sun B, Zhu Z, Mehareb E, Teng A, Han J, et al.
Plant J
. 2023 Oct;
117(2):573-589.
PMID: 37897092
The characterization of cis-regulatory DNA elements (CREs) is essential for deciphering the regulation of gene expression in eukaryotes. Although there have been endeavors to identify CREs in plants, the properties...
6.
Han J, Yu G, Zhang X, Dai Y, Zhang H, Zhang B, et al.
Int J Mol Sci
. 2023 Jul;
24(13).
PMID: 37445787
The functional annotation of genomes, including chromatin modifications, is essential to understand the intricate architecture of chromatin and the consequential gene regulation. However, such an annotation remains limited for cotton...
7.
Zhang X, Yu G, Dai Y, Zhang H, Wang K, Han J
BMC Plant Biol
. 2023 May;
23(1):260.
PMID: 37193952
Background: The adaptation of plants to cold stress involves changes in gene expression profiles that are associated with epigenetic regulation. Although the three-dimensional (3D) genome architecture is considered an important...
8.
Han J, Lopez-Arredondo D, Yu G, Wang Y, Wang B, Wall S, et al.
Proc Natl Acad Sci U S A
. 2022 Oct;
119(44):e2209743119.
PMID: 36279429
Allopolyploidization, resulting in divergent genomes in the same cell, is believed to trigger a "genome shock", leading to broad genetic and epigenetic changes. However, little is understood about chromatin and...
9.
Han J, Wang P, Wang Q, Lin Q, Chen Z, Yu G, et al.
Plant Cell
. 2020 May;
32(8):2457-2473.
PMID: 32471863
Deep sequencing of DNase-I treated chromatin (DNase-seq) can be used to identify DNase I-hypersensitive sites (DHSs) and facilitates genome-scale mining of de novo -regulatory DNA elements. Here, we adapted DNase-seq...
10.
Huang Y, Chen H, Han J, Zhang Y, Ma S, Yu G, et al.
Chromosoma
. 2019 Dec;
129(1):45-55.
PMID: 31848693
Modern sugarcane cultivars are highly polyploid and derived from the hybridization of Saccharum officinarum and S. spontaneum, thus leading to singularly complex genomes. The complex genome has hindered the study...