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Gaurab Mukherjee

Explore the profile of Gaurab Mukherjee including associated specialties, affiliations and a list of published articles. Areas
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Articles 15
Citations 2975
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Recent Articles
1.
Bogue M, Ball R, Walton D, Dunn M, Kolishovski G, Berger A, et al.
Mamm Genome . 2023 Aug; 34(4):509-519. PMID: 37581698
The Mouse Phenome Database continues to serve as a curated repository and analysis suite for measured attributes of members of diverse mouse populations. The repository includes annotation to community standard...
2.
Bogue M, Ball R, Philip V, Walton D, Dunn M, Kolishovski G, et al.
Nucleic Acids Res . 2022 Nov; 51(D1):D1067-D1074. PMID: 36330959
The Mouse Phenome Database (MPD; https://phenome.jax.org; RRID:SCR_003212), supported by the US National Institutes of Health, is a Biomedical Data Repository listed in the Trans-NIH Biomedical Informatics Coordinating Committee registry. As...
3.
Dolan M, Hill D, Mukherjee G, McAndrews M, Chesler E, Blake J
Sci Rep . 2020 Dec; 10(1):20848. PMID: 33257774
The emergence of the SARS-CoV-2 virus and subsequent COVID-19 pandemic initiated intense research into the mechanisms of action for this virus. It was quickly noted that COVID-19 presents more seriously...
4.
Dolan M, Hill D, Mukherjee G, McAndrews M, Chesler E, Blake J
bioRxiv . 2020 Sep; PMID: 32995795
The emergence of the SARS-CoV-2 virus and subsequent COVID-19 pandemic initiated intense research into the mechanisms of action for this virus. It was quickly noted that COVID-19 presents more seriously...
5.
Bogue M, Philip V, Walton D, Grubb S, Dunn M, Kolishovski G, et al.
Nucleic Acids Res . 2019 Nov; 48(D1):D716-D723. PMID: 31696236
The Mouse Phenome Database (MPD; https://phenome.jax.org) is a widely accessed and highly functional data repository housing primary phenotype data for the laboratory mouse accessible via APIs and providing tools to...
6.
Bubier J, Hill D, Mukherjee G, Reynolds T, Baker E, Berger A, et al.
Database (Oxford) . 2019 Mar; 2019. PMID: 30888410
Genomic data interpretation often requires analyses that move from a gene-by-gene focus to a focus on sets of genes that are associated with biological phenomena such as molecular processes, phenotypes,...
7.
Harrow J, Frankish A, Gonzalez J, Tapanari E, Diekhans M, Kokocinski F, et al.
Genome Res . 2012 Sep; 22(9):1760-74. PMID: 22955987
The GENCODE Consortium aims to identify all gene features in the human genome using a combination of computational analysis, manual annotation, and experimental validation. Since the first public release of...
8.
Cochrane G, Akhtar R, Bonfield J, Bower L, Demiralp F, Faruque N, et al.
Nucleic Acids Res . 2008 Nov; 37(Database issue):D19-25. PMID: 18978013
Dramatic increases in the throughput of nucleotide sequencing machines, and the promise of ever greater performance, have thrust bioinformatics into the era of petabyte-scale data sets. Sequence repositories, which provide...
9.
Cochrane G, Akhtar R, Aldebert P, Althorpe N, Baldwin A, Bates K, et al.
Nucleic Acids Res . 2007 Nov; 36(Database issue):D5-12. PMID: 18039715
The Ensembl Trace Archive (http://trace.ensembl.org/) and the EMBL Nucleotide Sequence Database (http://www.ebi.ac.uk/embl/), known together as the European Nucleotide Archive, continue to see growth in data volume and diversity. Selected major...
10.
Kulikova T, Akhtar R, Aldebert P, Althorpe N, Andersson M, Baldwin A, et al.
Nucleic Acids Res . 2006 Dec; 35(Database issue):D16-20. PMID: 17148479
The EMBL Nucleotide Sequence Database (http://www.ebi.ac.uk/embl) at the EMBL European Bioinformatics Institute, UK, offers a large and freely accessible collection of nucleotide sequences and accompanying annotation. The database is maintained...