Dipan Shaw
Overview
Explore the profile of Dipan Shaw including associated specialties, affiliations and a list of published articles.
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7
Citations
50
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Recent Articles
1.
Rickner H, Jiang L, Hong R, ONeill N, Mojica C, Snyder B, et al.
Nat Commun
. 2022 Oct;
13(1):6275.
PMID: 36271092
The use of iPSC derived brain organoid models to study neurodegenerative disease has been hampered by a lack of systems that accurately and expeditiously recapitulate pathogenesis in the context of...
2.
De Francesco A, Lovelace A, Shaw D, Qiu M, Wang Y, Gurung F, et al.
Phytopathology
. 2022 Jan;
112(1):116-130.
PMID: 35025694
' Liberibacter asiaticus' (Las) is an emergent bacterial pathogen that is associated with the devastating citrus huanglongbing (HLB). Vectored by the Asian citrus psyllid, Las colonizes the phloem tissue of...
3.
Chen H, Shaw D, Bu D, Jiang T
NAR Genom Bioinform
. 2021 Jun;
3(2):lqab057.
PMID: 34169280
Annotating the functions of gene products is a mainstay in biology. A variety of databases have been established to record functional knowledge at the gene level. However, functional annotations at...
4.
Shaw D, Chen H, Xie M, Jiang T
BMC Bioinformatics
. 2021 Jan;
22(1):24.
PMID: 33461501
Background: Long non-coding RNAs (lncRNAs) regulate diverse biological processes via interactions with proteins. Since the experimental methods to identify these interactions are expensive and time-consuming, many computational methods have been...
5.
Chen H, Shaw D, Zeng J, Bu D, Jiang T
Bioinformatics
. 2019 Sep;
35(14):i284-i294.
PMID: 31510699
Motivation: Alternative splicing generates multiple isoforms from a single gene, greatly increasing the functional diversity of a genome. Although gene functions have been well studied, little is known about the...
6.
Shaw D, Chen H, Jiang T
Bioinformatics
. 2018 Dec;
35(15):2535-2544.
PMID: 30535380
Motivation: Isoforms are mRNAs produced from the same gene locus by alternative splicing and may have different functions. Although gene functions have been studied extensively, little is known about the...
7.
Shaw D, Shohidull Islam A, Sohel Rahman M, Hasan M
BMC Bioinformatics
. 2014 Feb;
15 Suppl 2:S7.
PMID: 24564789
Three dimensional structure prediction of a protein from its amino acid sequence, known as protein folding, is one of the most studied computational problem in bioinformatics and computational biology. Since,...