Daniela Bartels
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Explore the profile of Daniela Bartels including associated specialties, affiliations and a list of published articles.
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25
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Recent Articles
1.
Handley K, Bartels D, OLoughlin E, Williams K, Trimble W, Skinner K, et al.
Environ Microbiol
. 2014 Mar;
16(11):3443-62.
PMID: 24628880
We reconstructed the complete 2.4 Mb-long genome of a previously uncultivated epsilonproteobacterium, Candidatus Sulfuricurvum sp. RIFRC-1, via assembly of short-read shotgun metagenomic data using a complexity reduction approach. Genome-based comparisons...
2.
Claud E, Keegan K, Brulc J, Lu L, Bartels D, Glass E, et al.
Microbiome
. 2014 Jan;
1(1):20.
PMID: 24450928
Background: Preterm infants represent a unique patient population that is born functionally immature and must accomplish development under the influence of a hospital environment. Neonatal necrotizing enterocolitis (NEC) is an...
3.
Wilke A, Glass E, Bartels D, Bischof J, Braithwaite D, DSouza M, et al.
Methods Enzymol
. 2013 Sep;
531:487-523.
PMID: 24060134
The democratized world of sequencing is leading to numerous data analysis challenges; MG-RAST addresses many of these challenges for diverse datasets, including amplicon datasets, shotgun metagenomes, and metatranscriptomes. The changes...
4.
Henry C, Overbeek R, Xia F, Best A, Glass E, Gilbert J, et al.
Biochim Biophys Acta
. 2011 Mar;
1810(10):967-77.
PMID: 21421023
Background: The development of next generation sequencing technology is rapidly changing the face of the genome annotation and analysis field. One of the primary uses for genome sequence data is...
5.
Strittmatter A, Liesegang H, Rabus R, Decker I, Amann J, Andres S, et al.
Environ Microbiol
. 2009 Feb;
11(5):1038-55.
PMID: 19187283
Sulfate-reducing bacteria (SRB) belonging to the metabolically versatile Desulfobacteriaceae are abundant in marine sediments and contribute to the global carbon cycle by complete oxidation of organic compounds. Desulfobacterium autotrophicum HRM2...
6.
Gross R, Guzman C, Sebaihia M, Martins Dos Santos V, Pieper D, Koebnik R, et al.
BMC Genomics
. 2008 Oct;
9:449.
PMID: 18826580
Background: Bordetella petrii is the only environmental species hitherto found among the otherwise host-restricted and pathogenic members of the genus Bordetella. Phylogenetically, it connects the pathogenic Bordetellae and environmental bacteria...
7.
Mela F, Fritsche K, Boersma H, van Elsas J, Bartels D, Meyer F, et al.
FEMS Microbiol Ecol
. 2008 Mar;
66(1):45-62.
PMID: 18355297
Plasmid pTer331 from the bacterium Collimonas fungivorans Ter331 is a new member of the pIPO2/pSB102 family of environmental plasmids. The 40 457-bp sequence of pTer331 codes for 44 putative ORFs,...
8.
Aziz R, Bartels D, Best A, DeJongh M, Disz T, Edwards R, et al.
BMC Genomics
. 2008 Feb;
9:75.
PMID: 18261238
Background: The number of prokaryotic genome sequences becoming available is growing steadily and is growing faster than our ability to accurately annotate them. Description: We describe a fully automated service...
9.
Gartemann K, Abt B, Bekel T, Burger A, Engemann J, Flugel M, et al.
J Bacteriol
. 2008 Jan;
190(6):2138-49.
PMID: 18192381
Clavibacter michiganensis subsp. michiganensis is a plant-pathogenic actinomycete that causes bacterial wilt and canker of tomato. The nucleotide sequence of the genome of strain NCPPB382 was determined. The chromosome is...
10.
Schneiker S, Perlova O, Kaiser O, Gerth K, Alici A, Altmeyer M, et al.
Nat Biotechnol
. 2007 Oct;
25(11):1281-9.
PMID: 17965706
The genus Sorangium synthesizes approximately half of the secondary metabolites isolated from myxobacteria, including the anti-cancer metabolite epothilone. We report the complete genome sequence of the model Sorangium strain S....