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D Kulp

Explore the profile of D Kulp including associated specialties, affiliations and a list of published articles. Areas
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Articles 9
Citations 11069
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Recent Articles
1.
Cline M, Shigeta R, Wheeler R, Siani-Rose M, Kulp D, Loraine A
Pac Symp Biocomput . 2004 Mar; :17-28. PMID: 14992489
Alternative splicing is a major source of variety in mammalian mRNAs, yet many questions remain on its downstream effects on protein function. To this end, we assessed the impact of...
2.
Lander E, Linton L, Birren B, Nusbaum C, Zody M, Baldwin J, et al.
Nature . 2001 Mar; 409(6822):860-921. PMID: 11237011
The human genome holds an extraordinary trove of information about human development, physiology, medicine and evolution. Here we report the results of an international collaboration to produce and make freely...
3.
Reese M, Kulp D, Tammana H, Haussler D
Genome Res . 2000 Apr; 10(4):529-38. PMID: 10779493
A hidden Markov model-based gene-finding system called Genie was applied to the genomic Adh region in Drosophila melanogaster as a part of the Genome Annotation Assessment Project (GASP). Predictions from...
4.
Adams M, Celniker S, Holt R, Evans C, Gocayne J, Amanatides P, et al.
Science . 2000 Mar; 287(5461):2185-95. PMID: 10731132
The fly Drosophila melanogaster is one of the most intensively studied organisms in biology and serves as a model system for the investigation of many developmental and cellular processes common...
5.
Reese M, Eeckman F, Kulp D, Haussler D
J Comput Biol . 1997 Oct; 4(3):311-23. PMID: 9278062
We present an improved splice site predictor for the genefinding program Genie. Genie is based on a generalized Hidden Markov Model (GHMM) that describes the grammar of a legal parse...
6.
Kulp D, Haussler D, Reese M, Eeckman F
Pac Symp Biocomput . 1997 Jan; :232-44. PMID: 9390295
We present an improved stochastic model of genes in DNA, and describe a method for integrating database homology into the probabilistic framework. A generalized hidden Markov model (GHMM) describes the...
7.
Kulp D, Haussler D, Reese M, Eeckman F
Proc Int Conf Intell Syst Mol Biol . 1996 Jan; 4:134-42. PMID: 8877513
We present a statistical model of genes in DNA. A Generalized Hidden Markov Model (GHMM) provides the framework for describing the grammar of a legal parse of a DNA sequence...
8.
Hirsch I, Sedor J, Kulp D, McCue P, Staas Jr W
Int J Androl . 1994 Feb; 17(1):29-34. PMID: 8005706
Experimental rodent models simulating the condition of neurogenic infertility have drawn attention to the role of potential epididymal dysfunction as an underlying cause. This functional obstruction of the genital tract...
9.
Li P, Kramer L, Pineo S, Kulp D
Proc Annu Symp Comput Appl Med Care . 1994 Jan; :344-8. PMID: 7949947
Mendelian Inheritance in Man (MIM) is an encyclopedia of medical genetics that has been in electronic form for over 30 years. In its lifetime, MIM has undergone many organizational and...