» Authors » Christopher H Tomkins-Tinch

Christopher H Tomkins-Tinch

Explore the profile of Christopher H Tomkins-Tinch including associated specialties, affiliations and a list of published articles. Areas
Snapshot
Articles 18
Citations 1749
Followers 0
Related Specialties
Top 10 Co-Authors
Published In
Affiliations
Soon will be listed here.
Recent Articles
1.
Krasilnikova L, Tomkins-Tinch C, Gayton A, Schaffner S, Dobbins S, Gladden-Young A, et al.
Bioinformatics . 2024 Dec; 40(12). PMID: 39673434
Summary: In viral genomic research and surveillance, inter-sample contamination can affect variant detection, analysis of within-host evolution, outbreak reconstruction, and detection of superinfections and recombination events. While sample barcoding methods...
2.
Parker E, Omah I, Varilly P, Magee A, Ayinla A, Sijuwola A, et al.
medRxiv . 2024 Jul; PMID: 38947052
Five years before the 2022-2023 global mpox outbreak Nigeria reported its first cases in nearly 40 years, with the ongoing epidemic since driven by sustained human-to-human transmission. However, limited genomic...
3.
Djuicy D, Omah I, Parker E, Tomkins-Tinch C, Otieno J, Yifomnjou M, et al.
medRxiv . 2024 Jul; PMID: 38947021
Nigeria and Cameroon reported their first mpox cases in over three decades in 2017 and 2018 respectively. The outbreak in Nigeria is recognised as an ongoing human epidemic. However, owing...
4.
Turbett S, Tomkins-Tinch C, Anahtar M, Dugdale C, Hyle E, Shenoy E, et al.
Clin Infect Dis . 2022 Oct; 76(5):850-860. PMID: 36268576
Background: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reinfection is poorly understood, partly because few studies have systematically applied genomic analysis to distinguish reinfection from persistent RNA detection related to...
5.
Petros B, Paull J, Tomkins-Tinch C, Loftness B, DeRuff K, Nair P, et al.
Med . 2022 Oct; 3(12):883-900.e13. PMID: 36198312
Background: Universities are vulnerable to infectious disease outbreaks, making them ideal environments to study transmission dynamics and evaluate mitigation and surveillance measures. Here, we analyze multimodal COVID-19-associated data collected during...
6.
Earnest R, Uddin R, Matluk N, Renzette N, Turbett S, Siddle K, et al.
Cell Rep Med . 2022 Apr; 3(4):100583. PMID: 35480627
The SARS-CoV-2 Delta variant rose to dominance in mid-2021, likely propelled by an estimated 40%-80% increased transmissibility over Alpha. To investigate if this ostensible difference in transmissibility is uniform across...
7.
Siddle K, Krasilnikova L, Moreno G, Schaffner S, Vostok J, Fitzgerald N, et al.
Cell . 2022 Jan; 185(3):485-492.e10. PMID: 35051367
An outbreak of over 1,000 COVID-19 cases in Provincetown, Massachusetts (MA), in July 2021-the first large outbreak mostly in vaccinated individuals in the US-prompted a comprehensive public health response, motivating...
8.
Siddle K, Krasilnikova L, Moreno G, Schaffner S, Vostok J, Fitzgerald N, et al.
medRxiv . 2021 Oct; PMID: 34704102
Multiple summer events, including large indoor gatherings, in Provincetown, Massachusetts (MA), in July 2021 contributed to an outbreak of over one thousand COVID-19 cases among residents and visitors. Most cases...
9.
Earnest R, Uddin R, Matluk N, Renzette N, Siddle K, Loreth C, et al.
medRxiv . 2021 Oct; PMID: 34642698
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Delta variant quickly rose to dominance in mid-2021, displacing other variants, including Alpha. Studies using data from the United Kingdom and India...
10.
Botti-Lodovico Y, Nair P, Nosamiefan D, Stremlau M, Schaffner S, Agignoae S, et al.
Viruses . 2021 Aug; 13(8). PMID: 34452470
While investigating a signal of adaptive evolution in humans at the gene LARGE, we encountered an intriguing finding by Dr. Stefan Kunz that the gene plays a critical role in...