Cecilia H Deng
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Explore the profile of Cecilia H Deng including associated specialties, affiliations and a list of published articles.
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30
Citations
418
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Recent Articles
1.
Hafner A, DeLeo V, Deng C, Elsik C, S Fleming D, Harrison P, et al.
Gigascience
. 2025 Jan;
14.
PMID: 39804724
The scientific community has long benefited from the opportunities provided by data reuse. Recognizing the need to identify the challenges and bottlenecks to reuse in the agricultural research community and...
2.
Rashid U, Wu C, Shiller J, Smith K, Crowhurst R, Davy M, et al.
Bioinformatics
. 2024 Jul;
40(8).
PMID: 39078114
Summary: Genome assembly projects have grown exponentially due to breakthroughs in sequencing technologies and assembly algorithms. Evaluating the quality of genome assemblies is critical to ensure the reliability of downstream...
3.
Wang X, Zhou Y, Chai X, Foster T, Deng C, Wu T, et al.
New Phytol
. 2024 Mar;
242(3):1218-1237.
PMID: 38481030
Nitrogen is an essential nutrient for plant growth and serves as a signaling molecule to regulate gene expression inducing physiological, growth and developmental responses. An excess or deficiency of nitrogen...
4.
Li W, Chu C, Li H, Zhang H, Sun H, Wang S, et al.
Nat Genet
. 2024 Feb;
56(3):505-516.
PMID: 38347217
Dwarfing rootstocks have transformed the production of cultivated apples; however, the genetic basis of rootstock-induced dwarfing remains largely unclear. We have assembled chromosome-level, near-gapless and haplotype-resolved genomes for the popular...
5.
Deng C, Naithani S, Kumari S, Cobo-Simon I, Quezada-Rodriguez E, Skrabisova M, et al.
Database (Oxford)
. 2023 Dec;
2023.
PMID: 38079567
Large-scale genotype and phenotype data have been increasingly generated to identify genetic markers, understand gene function and evolution and facilitate genomic selection. These datasets hold immense value for both current...
6.
Naithani S, Deng C, Sahu S, Jaiswal P
Biomolecules
. 2023 Sep;
13(9).
PMID: 37759803
The availability of multiple sequenced genomes from a single species made it possible to explore intra- and inter-specific genomic comparisons at higher resolution and build clade-specific pan-genomes of several crops....
7.
Wang Y, Ding Y, Zhao Q, Wu C, Deng C, Wang J, et al.
Plant J
. 2023 Aug;
116(5):1492-1507.
PMID: 37648286
Dihydrochalcones (DHCs) including phlorizin (phloretin 2'-O-glucoside) and its positional isomer trilobatin (phloretin 4'-O-glucoside) are the most abundant phenylpropanoids in apple (Malus spp.). Transcriptional regulation of DHC production is poorly understood...
8.
Vasey J, Jones D, Deng C, Hedderley D, Martinez-Urtaza J, Powell A, et al.
Microb Genom
. 2023 Jun;
9(6).
PMID: 37266976
has been identified as an emerging human pathogen worldwide with cases undergoing a global expansion over recent decades in phase with climate change. New Zealand had remained free of outbreaks...
9.
Chen X, Wang M, Deng C, Beatson R, Templeton K, Atkinson R, et al.
BMC Plant Biol
. 2023 May;
23(1):280.
PMID: 37231379
Background: Hops (Humulus lupulus L.) are a dioecious climbing perennial, with the dried mature "cones" (strobili) of the pistillate/female inflorescences being widely used as both a bittering agent and to...
10.
Fan X, Li Y, Deng C, Wang S, Wang Z, Wang Y, et al.
Plant J
. 2022 Dec;
113(4):772-786.
PMID: 36575587
Propagation through stem cuttings is a popular method worldwide for species such as fruit tree rootstocks and forest trees. Adventitious root (AR) formation from stem cuttings is crucial for effective...