Artem Babaian
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Explore the profile of Artem Babaian including associated specialties, affiliations and a list of published articles.
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23
Citations
583
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Recent Articles
1.
Zheludev I, Edgar R, Lopez-Galiano M, de la Pena M, Babaian A, Bhatt A, et al.
Cell
. 2024 Oct;
187(23):6521-6536.e18.
PMID: 39481381
Here, we describe "obelisks," a class of heritable RNA elements sharing several properties: (1) apparently circular RNA ∼1 kb genome assemblies, (2) predicted rod-like genome-wide secondary structures, and (3) open...
2.
Babaian A, Edgar R
PeerJ
. 2024 Aug;
10.
PMID: 39139825
[This corrects the article DOI: 10.7717/peerj.14055.].
3.
Gupta P, Hiller A, Chowdhury J, Lim D, Lim D, Saeij J, et al.
Virus Evol
. 2024 May;
10(1):veae040.
PMID: 38817668
We are entering a 'Platinum Age of Virus Discovery', an era marked by exponential growth in the discovery of virus biodiversity, and driven by advances in metagenomics and computational analysis....
4.
Kuhn J, Babaian A, Bergner L, Deny P, Glebe D, Horie M, et al.
J Gen Virol
. 2024 Feb;
105(2).
PMID: 38421275
is a family for negative-sense RNA viruses with circular, viroid-like genomes of about 1.5-1.7 kb that are maintained in mammals, amphibians, birds, fish, insects and reptiles. Deltaviruses, for instance, can...
5.
Lee S, Kim G, Levy Karin E, Mirdita M, Park S, Chikhi R, et al.
Cold Spring Harb Perspect Biol
. 2024 Feb;
16(5).
PMID: 38316555
The recent CASP15 competition highlighted the critical role of multiple sequence alignments (MSAs) in protein structure prediction, as demonstrated by the success of the top AlphaFold2-based prediction methods. To push...
6.
Zheludev I, Edgar R, Lopez-Galiano M, de la Pena M, Babaian A, Bhatt A, et al.
bioRxiv
. 2024 Jan;
PMID: 38293115
Here, we describe the "Obelisks," a previously unrecognised class of viroid-like elements that we first identified in human gut metatranscriptomic data. "Obelisks" share several properties: (i) apparently circular RNA ~1kb...
7.
Hufsky F, Abecasis A, Babaian A, Beck S, Brierley L, Dellicour S, et al.
Viruses
. 2023 Oct;
15(10).
PMID: 37896809
The 2023 International Virus Bioinformatics Meeting was held in Valencia, Spain, from 24-26 May 2023, attracting approximately 180 participants worldwide. The primary objective of the conference was to establish a...
8.
Lee S, Kim G, Levy Karin E, Mirdita M, Park S, Chikhi R, et al.
bioRxiv
. 2023 Jul;
PMID: 37503235
The recent CASP15 competition highlighted the critical role of multiple sequence alignments (MSAs) in protein structure prediction, as demonstrated by the success of the top AlphaFold2-based prediction methods. To push...
9.
Begeman A, Babaian A, Lewis S
mSystems
. 2023 May;
8(3):e0100222.
PMID: 37199915
RNA viruses are ubiquitous components of the global virosphere, yet relatively little is known about their genetic diversity or the cellular mechanisms by which they exploit the biology of their...
10.
Forgia M, Navarro B, Daghino S, Cervera A, Gisel A, Perotto S, et al.
Nat Commun
. 2023 May;
14(1):2591.
PMID: 37147358
Earth's life may have originated as self-replicating RNA, and it has been argued that RNA viruses and viroid-like elements are remnants of such pre-cellular RNA world. RNA viruses are defined...