Allison R Greenplate
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Explore the profile of Allison R Greenplate including associated specialties, affiliations and a list of published articles.
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64
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5546
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Recent Articles
1.
Chen J, Ionita M, Feng Y, Lu Y, Orzechowski P, Garai S, et al.
Nat Commun
. 2025 Feb;
16(1):1576.
PMID: 39939580
Recent advances in cytometry have enabled high-throughput data collection with multiple single-cell protein expression measurements. The significant biological and technical variance in cytometry has posed a formidable challenge during the...
2.
Woerner J, Westbrook T, Jeong S, Shivakumar M, Greenplate A, Apostolidis S, et al.
Pac Symp Biocomput
. 2024 Dec;
30:522-534.
PMID: 39670393
Inflammatory bowel disease (IBD), encompassing Crohn's disease (CD) and ulcerative colitis (UC), has a significant genetic component and is increasingly prevalent due to environmental factors. Current polygenic risk scores (PRS)...
3.
Kim J, Ionita M, Lee M, McKeague M, Pattekar A, Painter M, et al.
Cell Rep Med
. 2024 Nov;
5(11):101808.
PMID: 39515318
Single-cell cytometry data are crucial for understanding the role of the immune system in diseases and responses to treatment. However, traditional methods for annotating cytometry data face challenges in scalability,...
4.
Chong E, Kumashie K, Chong E, Fabrizio J, Gupta A, Svoboda J, et al.
J Infect Dis
. 2024 Jul;
230(1):15-27.
PMID: 39052709
Patients with B-cell lymphomas have altered cellular components of vaccine responses due to malignancy and therapy, and the optimal timing of vaccination relative to therapy remains unknown. Severe acute respiratory...
5.
Chen J, Ionita M, Feng Y, Lu Y, Orzechowski P, Garai S, et al.
bioRxiv
. 2024 May;
PMID: 38766268
Recent advances in cytometry technology have enabled high-throughput data collection with multiple single-cell protein expression measurements. The significant biological and technical variance between samples in cytometry has long posed a...
6.
Thomson Z, He Z, Swanson E, Henderson K, Phalen C, Zaim S, et al.
Nat Immunol
. 2024 Jan;
25(3):577.
PMID: 38267693
No abstract available.
7.
Wong A, Devason A, Umana I, Cox T, Dohnalova L, Litichevskiy L, et al.
Cell
. 2023 Oct;
186(22):4851-4867.e20.
PMID: 37848036
Post-acute sequelae of COVID-19 (PASC, "Long COVID") pose a significant global health challenge. The pathophysiology is unknown, and no effective treatments have been found to date. Several hypotheses have been...
8.
Thomson Z, He Z, Swanson E, Henderson K, Phalen C, Zaim S, et al.
Nat Immunol
. 2023 Oct;
24(11):1947-1959.
PMID: 37845489
Age-associated changes in the T cell compartment are well described. However, limitations of current single-modal or bimodal single-cell assays, including flow cytometry, RNA-seq (RNA sequencing) and CITE-seq (cellular indexing of...
9.
Painter M, Johnston T, Lundgreen K, Santos J, Qin J, Goel R, et al.
Nat Immunol
. 2023 Sep;
24(10):1711-1724.
PMID: 37735592
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection of vaccinated individuals is increasingly common but rarely results in severe disease, likely due to the enhanced potency and accelerated kinetics of...
10.
Wang G, Lyudovyk O, Kim J, Lin Y, Elhanati Y, Mathew D, et al.
STAR Protoc
. 2023 May;
4(2):102289.
PMID: 37159385
The current abundance of immunotherapy clinical trials presents an opportunity to learn about the underlying mechanisms and pharmacodynamic effects of novel drugs on the human immune system. Here, we present...