Alexander Kozik
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Explore the profile of Alexander Kozik including associated specialties, affiliations and a list of published articles.
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27
Citations
2203
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Recent Articles
1.
Gurdon C, Kozik A, Tao R, Poulev A, Armas I, Michelmore R, et al.
Plant Physiol
. 2021 Mar;
186(2):929-944.
PMID: 33768232
Dietary flavonoids play an important role in human nutrition and health. Flavonoid biosynthesis genes have recently been identified in lettuce (Lactuca sativa); however, few mutants have been characterized. We now...
2.
Han R, Wong A, Tang Z, Truco M, Lavelle D, Kozik A, et al.
J Exp Bot
. 2021 Mar;
72(8):2979-2994.
PMID: 33681981
Flower opening and closure are traits of reproductive importance in all angiosperms because they determine the success of self- and cross-pollination. The temporal nature of this phenotype rendered it a...
3.
Kozik A, Rowan B, Lavelle D, Berke L, Schranz M, Michelmore R, et al.
PLoS Genet
. 2019 Aug;
15(8):e1008373.
PMID: 31469821
Plant mitochondrial genomes are usually assembled and displayed as circular maps based on the widely-held view across the broad community of life scientists that circular genome-sized molecules are the primary...
4.
Reyes-Chin-Wo S, Wang Z, Yang X, Kozik A, Arikit S, Song C, et al.
Nat Commun
. 2017 Apr;
8:14953.
PMID: 28401891
Lettuce (Lactuca sativa) is a major crop and a member of the large, highly successful Compositae family of flowering plants. Here we present a reference assembly for the species and...
5.
Bertioli D, Cannon S, Froenicke L, Huang G, Farmer A, Cannon E, et al.
Nat Genet
. 2016 Feb;
48(4):438-46.
PMID: 26901068
Cultivated peanut (Arachis hypogaea) is an allotetraploid with closely related subgenomes of a total size of ∼2.7 Gb. This makes the assembly of chromosomal pseudomolecules very challenging. As a foundation...
6.
Hill T, Ashrafi H, Chin-Wo S, Stoffel K, Truco M, Kozik A, et al.
G3 (Bethesda)
. 2015 Sep;
5(11):2341-55.
PMID: 26355020
Our ability to assemble complex genomes and construct ultradense genetic maps now allows the determination of recombination rates, translocations, and the extent of genomic collinearity between populations, species, and genera....
7.
Wroblewski T, Matvienko M, Piskurewicz U, Xu H, Martineau B, Wong J, et al.
RNA
. 2014 Oct;
20(12):1987-99.
PMID: 25344399
The experimental induction of RNA silencing in plants often involves expression of transgenes encoding inverted repeat (IR) sequences to produce abundant dsRNAs that are processed into small RNAs (sRNAs). These...
8.
Truco M, Ashrafi H, Kozik A, van Leeuwen H, Bowers J, Wo S, et al.
G3 (Bethesda)
. 2013 Apr;
3(4):617-631.
PMID: 23550116
We have generated an ultra-high-density genetic map for lettuce, an economically important member of the Compositae, consisting of 12,842 unigenes (13,943 markers) mapped in 3696 genetic bins distributed over nine...
9.
Hill T, Ashrafi H, Reyes-Chin-Wo S, Yao J, Stoffel K, Truco M, et al.
PLoS One
. 2013 Feb;
8(2):e56200.
PMID: 23409153
The widely cultivated pepper, Capsicum spp., important as a vegetable and spice crop world-wide, is one of the most diverse crops. To enhance breeding programs, a detailed characterization of Capsicum...
10.
Matvienko M, Kozik A, Froenicke L, Lavelle D, Martineau B, Perroud B, et al.
PLoS One
. 2013 Feb;
8(2):e55913.
PMID: 23409088
Several applications of high throughput genome and transcriptome sequencing would benefit from a reduction of the high-copy-number sequences in the libraries being sequenced and analyzed, particularly when applied to species...