Self-association of Linker Histone H5 and of Its Globular Domain: Evidence for Specific Self-contacts
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The ability of avian-specific linker histone H5, and the globular domains of H5 (GH5) and H1(0) (GH1(0), to self-associate either free in solution or when bound to DNA was investigated. All three proteins underwent a salt-dependent increase in turbidity that may be indicative of nonspecific interactions. Dithiobis(succinimidyl propionate) cross-linking was used to measure specific contacts for both H5 and GH5 free in solution and bound to DNA. H5 and GH5 each became cross-linked in solution, with GH5 displaying divalent polymerization interactions, which suggests that two specific surfaces were involved in the assembly process. For GH5-DNA complexes, cross-linking appeared to be largely the consequence of aggregation, but under low concentrations of DSP, cross-linking GH5 was observed to assemble preferentially onto DNA before oligomerizing to form massive aggregates. Both linear and supercoiled DNA facilitated GH5 interactions compared to assembly in solution; differences in the distribution of cross-linked polymer sizes indicates that assembly is dependent on both the presence of DNA and the morphology of the DNA. Finally, on the basis of a technique referred to as quantitative proteolysis, GH5 assembly on DNA appears to involve specific protein-protein contacts involving the C terminus of one partner. Overall, the cumulative results reported here support the premise that linker histones assemble specifically both in solution and on DNA.
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Single-Molecule Studies of the Linker Histone H1 Binding to DNA and the Nucleosome.
Yue H, Fang H, Wei S, Hayes J, Lee T Biochemistry. 2016; 55(14):2069-77.
PMID: 27010485 PMC: 5436050. DOI: 10.1021/acs.biochem.5b01247.
The Structural Determinants behind the Epigenetic Role of Histone Variants.
Cheema M, Ausio J Genes (Basel). 2015; 6(3):685-713.
PMID: 26213973 PMC: 4584325. DOI: 10.3390/genes6030685.
Panagopoulos I, Gorunova L, Bjerkehagen B, Heim S PLoS One. 2015; 10(1):e0117010.
PMID: 25621995 PMC: 4306483. DOI: 10.1371/journal.pone.0117010.
Kowalski A, Palyga J Chromosome Res. 2011; 19(5):579-90.
PMID: 21656257 PMC: 3139888. DOI: 10.1007/s10577-011-9218-3.