» Articles » PMID: 8483901

Predicting Protein Diffusion Coefficients

Overview
Specialty Science
Date 1993 May 1
PMID 8483901
Citations 35
Authors
Affiliations
Soon will be listed here.
Abstract

Diffusion coefficients for proteins in water are predicted. The numerical method developed is general enough to be applied to a wide range of protein surface shapes, from rodlike to globular. Results are presented for lysozyme and tobacco mosaic virus, and they are compared with actual data and with predictions made by less general methods.

Citing Articles

Residue Interactions Guide Translational Diffusion of Proteins.

Fazelpour E, Haseleu J, Fennell C J Phys Chem B. 2025; 129(9):2493-2504.

PMID: 39999471 PMC: 11891898. DOI: 10.1021/acs.jpcb.4c06069.


Protein translational diffusion as a way to detect intermolecular interactions.

Zuev Y, Kusova A, Sitnitsky A Biophys Rev. 2023; 15(5):1111-1125.

PMID: 37975004 PMC: 10643801. DOI: 10.1007/s12551-023-01108-y.


Do I Need to Trypsin Digest Before Releasing IgG Glycans With PNGase-F?.

Birx L, Popov M, Orlando R J Biomol Tech. 2023; .

PMID: 37097917 PMC: 10121237. DOI: 10.7171/3fc1f5fe.6db6338a.


Design of a Portable Microfluidic Platform for EGOT-Based in Liquid Biosensing.

Segantini M, Parmeggiani M, Ballesio A, Palmara G, Frascella F, Marasso S Sensors (Basel). 2022; 22(3).

PMID: 35161715 PMC: 8839715. DOI: 10.3390/s22030969.


Hydrophobic and electrostatic interactions modulate protein escape at the ribosomal exit tunnel.

Bui P, Hoang T Biophys J. 2021; 120(21):4798-4808.

PMID: 34555360 PMC: 8595739. DOI: 10.1016/j.bpj.2021.09.027.


References
1.
KUNTZ Jr I, Kauzmann W . Hydration of proteins and polypeptides. Adv Protein Chem. 1974; 28:239-345. DOI: 10.1016/s0065-3233(08)60232-6. View

2.
Venable R, Pastor R . Frictional models for stochastic simulations of proteins. Biopolymers. 1988; 27(6):1001-14. DOI: 10.1002/bip.360270609. View

3.
Wegener W . On an exact starting expression for macromolecular hydrodynamic models. Biopolymers. 1986; 25(4):627-37. DOI: 10.1002/bip.360250408. View

4.
Garcia de la Torre J, Bloomfield V . Hydrodynamic properties of complex, rigid, biological macromolecules: theory and applications. Q Rev Biophys. 1981; 14(1):81-139. DOI: 10.1017/s0033583500002080. View