Split Decomposition: a Technique to Analyze Viral Evolution

Overview

Journal Proc Natl Acad Sci U S A

Specialty Science

Date 1993 Nov 1

PMID 8234292

Citations 11

Authors

J Dopazo

A Dress

A Von Haeseler

Affiliations

Soon will be listed here.

Abstract

A clustering technique allowing a restricted amount of overlapping and based on an abstract theory of coherent decompositions of finite metrics is used to analyze the evolution of foot-and-mouth disease viruses. The emerging picture is compatible with the existence of viral populations with a quasispecies structure and illustrates various forms of evolution of this virus family. In addition, it allows the correlation of these forms with geographic occurrence.

Citing Articles

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Identifying a few foot-and-mouth disease virus signature nucleotide strings for computational genotyping.

Lin G, Cai Z, Wu J, Wan X, Xu L, Goebel R BMC Bioinformatics. 2008; 9:279.

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Comparative genomics of foot-and-mouth disease virus.

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Analyses of genotypic diversity among North, South, and Central American isolates of sugarcane yellow leaf virus: evidence for Colombian origins and for intraspecific spatial phylogenetic variation.

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