Nonhydrolyzable Phosphotyrosyl Mimetics for the Preparation of Phosphatase-resistant SH2 Domain Inhibitors
Overview
Affiliations
Src homology 2 (SH2) domains participate in protein tyrosine kinase (PTK)-mediated cellular signal transduction through their ability to bind with high affinity to phosphotyrosyl (pTyr)-bearing protein sequences. Although peptides containing pTyr competitively inhibit the binding between phosphoproteins and cognate SH2 proteins in a sequence-specific manner, such peptides are rapidly dephosphorylated by cellular phosphatases. We now describe our efforts to develop SH2 inhibitory peptides containing phosphatase-resistant pTyr surrogates. The parent compound, (phosphonomethyl)phenylalanine (Pmp), is a phosphonate-based mimetic of pTyr in which the phosphate ester oxygen (> COPO3H2) has been replaced by a methylene unit (> CCX2PO3H2, X2 = H2). Pmp analogues bearing fluorine (X2 = H, F or X2 = F2) or hydroxyl (X2 = H, OH) substituents on the phosphonate alpha-methylene carbon have been prepared and incorporated into peptides for use as SH2 domain inhibitors. In an assay using the C-terminal SH2 domain of phosphatidylinositol (PI) 3-kinase, peptides having a GXVPML sequence [where X = pTyr, Pmp, hydroxy-Pmp (HPmp), monofluoro-Pmp (FPmp), and difluoro-Pmp (F2Pmp)] exhibited binding potency in the order HPmp < Pmp < FPmp < F2Pmp = pTyr. Distinct peptide sequences which bind selectively with Src and Grb2 SH2 domains were also prepared with pTyr and F2Pmp. The F2Pmp peptides bound with high (0.2- to 5-fold) relative affinity, compared to analogous pTyr peptides. We conclude that peptides containing F2Pmp bind to SH2 domains with high affinity and specificity and, being resistant to cellular phosphatases, should provide a generally useful tool for disrupting SH2 domain-mediated signaling pathways in intact cells.
Genetic Encoding of Phosphorylated Amino Acids into Proteins.
Allen M, Karplus P, Mehl R, Cooley R Chem Rev. 2024; 124(10):6592-6642.
PMID: 38691379 PMC: 11658404. DOI: 10.1021/acs.chemrev.4c00110.
Identification and Optimization of Protein Tyrosine Phosphatase Inhibitors Via Fragment Ligation.
Tiemann M, Rademann J Methods Mol Biol. 2023; 2743:239-270.
PMID: 38147220 DOI: 10.1007/978-1-0716-3569-8_16.
Enhanced access to the human phosphoproteome with genetically encoded phosphothreonine.
Moen J, Mohler K, Rogulina S, Shi X, Shen H, Rinehart J Nat Commun. 2022; 13(1):7226.
PMID: 36433969 PMC: 9700786. DOI: 10.1038/s41467-022-34980-5.
A Formylglycine-Peptide for the Site-Directed Identification of Phosphotyrosine-Mimetic Fragments.
Tiemann M, Nawrotzky E, Schmieder P, Wehrhan L, Bergemann S, Martos V Chemistry. 2022; 28(57):e202201282.
PMID: 35781901 PMC: 9804470. DOI: 10.1002/chem.202201282.
Accorsi M, Tiemann M, Wehrhan L, Finn L, Cruz R, Rautenberg M Angew Chem Int Ed Engl. 2022; 61(25):e202203579.
PMID: 35303375 PMC: 9323422. DOI: 10.1002/anie.202203579.