Singh S, Singh J, Varshney U
J Bacteriol. 2024; 206(7):e0011924.
PMID: 38837341
PMC: 11270870.
DOI: 10.1128/jb.00119-24.
Amundsen S, Smith G
Microbiol Mol Biol Rev. 2023; 87(4):e0004123.
PMID: 38047637
PMC: 10732027.
DOI: 10.1128/mmbr.00041-23.
Singh S, Lahry K, Mandava C, Singh J, Shah R, Sanyal S
RNA Biol. 2023; 20(1):681-692.
PMID: 37676049
PMC: 10486304.
DOI: 10.1080/15476286.2023.2253395.
Silbert J, de Lorenzo V, Aparicio T
ACS Synth Biol. 2021; 10(4):690-697.
PMID: 33750103
PMC: 8483437.
DOI: 10.1021/acssynbio.0c00611.
Samhita L, Raval P, Stephenson G, Thutupalli S, Agashe D
Evolution. 2021; 75(5):1201-1217.
PMID: 33491193
PMC: 8248024.
DOI: 10.1111/evo.14179.
An Epistasis Analysis of and in K-12.
Klimova A, Sandler S
Genetics. 2020; 216(2):381-393.
PMID: 32816866
PMC: 7536844.
DOI: 10.1534/genetics.120.303476.
Monomeric NADH-Oxidizing Methylenetetrahydrofolate Reductases from Mycobacterium smegmatis Lack Flavin Coenzyme.
Sah S, Lahry K, Talwar C, Singh S, Varshney U
J Bacteriol. 2020; 202(12).
PMID: 32253341
PMC: 7253612.
DOI: 10.1128/JB.00709-19.
Near-continuously synthesized leading strands in are broken by ribonucleotide excision.
Cronan G, Kouzminova E, Kuzminov A
Proc Natl Acad Sci U S A. 2019; 116(4):1251-1260.
PMID: 30617079
PMC: 6347710.
DOI: 10.1073/pnas.1814512116.
Regeneration of Escherichia coli from Minicells through Lateral Gene Transfer.
Kobayashi H
J Bacteriol. 2018; 200(9).
PMID: 29463604
PMC: 5892112.
DOI: 10.1128/JB.00630-17.
Species-Specific Interactions of Arr with RplK Mediate Stringent Response in Bacteria.
Agrawal P, Varada R, Sah S, Bhattacharyya S, Varshney U
J Bacteriol. 2018; 200(6).
PMID: 29311276
PMC: 5826033.
DOI: 10.1128/JB.00722-17.
Coevolution of the translational machinery optimizes initiation with unusual initiator tRNAs and initiation codons in mycoplasmas.
Ayyub S, Dobriyal D, Shah R, Lahry K, Bhattacharyya M, Bhattacharyya S
RNA Biol. 2017; 15(1):70-80.
PMID: 28901843
PMC: 5786046.
DOI: 10.1080/15476286.2017.1377879.
Unveiling the Hybrid Genome Structure of RR1 (HB101 RecA).
Jeong H, Sim Y, Kim H, Lee S
Front Microbiol. 2017; 8:585.
PMID: 28421066
PMC: 5379014.
DOI: 10.3389/fmicb.2017.00585.
Contributions of the N- and C-Terminal Domains of Initiation Factor 3 to Its Functions in the Fidelity of Initiation and Antiassociation of the Ribosomal Subunits.
Ayyub S, Dobriyal D, Varshney U
J Bacteriol. 2017; 199(11).
PMID: 28320882
PMC: 5424250.
DOI: 10.1128/JB.00051-17.
Complete Genome Sequence of ER2796, a DNA Methyltransferase-Deficient Strain of Escherichia coli K-12.
Anton B, Mongodin E, Agrawal S, Fomenkov A, Byrd D, Roberts R
PLoS One. 2015; 10(5):e0127446.
PMID: 26010885
PMC: 4444293.
DOI: 10.1371/journal.pone.0127446.
One-carbon metabolic pathway rewiring in Escherichia coli reveals an evolutionary advantage of 10-formyltetrahydrofolate synthetase (Fhs) in survival under hypoxia.
Sah S, Aluri S, Rex K, Varshney U
J Bacteriol. 2014; 197(4):717-26.
PMID: 25448816
PMC: 4334196.
DOI: 10.1128/JB.02365-14.
Avoiding acidic region streaking in two-dimensional gel electrophoresis: case study with two bacterial whole cell protein extracts.
Roy A, Varshney U, Pal D
J Biosci. 2014; 39(4):631-42.
PMID: 25116618
DOI: 10.1007/s12038-014-9453-9.
How many initiator tRNA genes does Escherichia coli need?.
Samhita L, Nanjundiah V, Varshney U
J Bacteriol. 2014; 196(14):2607-15.
PMID: 24816600
PMC: 4097586.
DOI: 10.1128/JB.01620-14.
Initiation with elongator tRNAs.
Samhita L, Virumae K, Remme J, Varshney U
J Bacteriol. 2013; 195(18):4202-9.
PMID: 23852868
PMC: 3754738.
DOI: 10.1128/JB.00637-13.
Unconventional initiator tRNAs sustain Escherichia coli.
Samhita L, Shetty S, Varshney U
Proc Natl Acad Sci U S A. 2012; 109(32):13058-63.
PMID: 22829667
PMC: 3420168.
DOI: 10.1073/pnas.1207868109.
Role of 16S ribosomal RNA methylations in translation initiation in Escherichia coli.
Das G, Thotala D, Kapoor S, Karunanithi S, Thakur S, Singh N
EMBO J. 2008; 27(6):840-51.
PMID: 18288206
PMC: 2274930.
DOI: 10.1038/emboj.2008.20.