Alexandrov L, Rasmussen K, Bishop A, Alexandrov B
Sci Rep. 2017; 7(1):9731.
PMID: 28851939
PMC: 5575098.
DOI: 10.1038/s41598-017-09537-y.
Leng F
Biophys Rev. 2017; 8(3):197-207.
PMID: 28510223
PMC: 5425792.
DOI: 10.1007/s12551-016-0204-z.
Leng F
Biophys Rev. 2017; 8(Suppl 1):123-133.
PMID: 28510217
PMC: 5418508.
DOI: 10.1007/s12551-016-0239-1.
Osmundson J, Darst S
Bacteriophage. 2013; 3(1):e24767.
PMID: 23819108
PMC: 3694059.
DOI: 10.4161/bact.24767.
Sheinin M, Forth S, Marko J, Wang M
Phys Rev Lett. 2011; 107(10):108102.
PMID: 21981534
PMC: 3201814.
DOI: 10.1103/PhysRevLett.107.108102.
An approach to gene-specific transcription inhibition using oligonucleotides complementary to the template strand of the open complex.
Milne L, Xu Y, Perrin D, Sigman D
Proc Natl Acad Sci U S A. 2000; 97(7):3136-41.
PMID: 10716709
PMC: 16205.
DOI: 10.1073/pnas.97.7.3136.
DNA bending and wrapping around RNA polymerase: a "revolutionary" model describing transcriptional mechanisms.
Coulombe B, Burton Z
Microbiol Mol Biol Rev. 1999; 63(2):457-78.
PMID: 10357858
PMC: 98973.
DOI: 10.1128/MMBR.63.2.457-478.1999.
Distortion in the spacer region of Pm during activation of middle transcription of phage Mu.
Artsimovitch I, Howe M
Proc Natl Acad Sci U S A. 1996; 93(18):9408-13.
PMID: 8790343
PMC: 38441.
DOI: 10.1073/pnas.93.18.9408.
A cryptic promoter in the O(R) region of bacteriophage lambda.
Woody S, Fong R, Gussin G
J Bacteriol. 1993; 175(17):5648-54.
PMID: 8366050
PMC: 206623.
DOI: 10.1128/jb.175.17.5648-5654.1993.
Promoters responsive to DNA bending: a common theme in prokaryotic gene expression.
Perez-Martin J, Rojo F, de Lorenzo V
Microbiol Rev. 1994; 58(2):268-90.
PMID: 8078436
PMC: 372964.
DOI: 10.1128/mr.58.2.268-290.1994.
Large-scale opening of A + T rich regions within supercoiled DNA molecules is suppressed by salt.
Bowater R, Lilley D
Nucleic Acids Res. 1994; 22(11):2042-50.
PMID: 8029010
PMC: 308119.
DOI: 10.1093/nar/22.11.2042.
Ubiquitous and gene-specific regulatory 5' sequences in a sea urchin histone DNA clone coding for histone protein variants.
Busslinger M, Portmann R, Irminger J, Birnstiel M
Nucleic Acids Res. 1980; 8(5):957-77.
PMID: 7443547
PMC: 323965.
DOI: 10.1093/nar/8.5.957.
Antibodies against the subunits of E. coli RNA polymerase as probes for subunit-specific binding of DNA and other ligands.
Stender W
Nucleic Acids Res. 1980; 8(6):1405-20.
PMID: 7001367
PMC: 324000.
DOI: 10.1093/nar/8.6.1405.
Contacts between Escherichia coli RNA polymerase and an early promoter of phage T7.
Siebenlist U, Gilbert W
Proc Natl Acad Sci U S A. 1980; 77(1):122-6.
PMID: 6987648
PMC: 348220.
DOI: 10.1073/pnas.77.1.122.
Mechanistic aspects of promoter binding and chain initiation by RNA polymerase.
Wu C, Tweedy N
Mol Cell Biochem. 1982; 47(3):129-49.
PMID: 6755217
DOI: 10.1007/BF00229597.
Deoxydodecanucleotide heteroduplex d(TTTTATAATAAA). d(TTTATTATAAAA) containing the promoter Pribnow sequence TATAAT. I. Double-helix stability by UV spectrophotometry and calorimetry.
Bolewska K, Zielenkiewicz A, Wierzchowski K
Nucleic Acids Res. 1984; 12(7):3245-56.
PMID: 6718250
PMC: 318742.
DOI: 10.1093/nar/12.7.3245.
Mapping of single-stranded regions in duplex DNA at the sequence level: single-strand-specific cytosine methylation in RNA polymerase-promoter complexes.
Kirkegaard K, Buc H, Spassky A, Wang J
Proc Natl Acad Sci U S A. 1983; 80(9):2544-8.
PMID: 6573669
PMC: 393862.
DOI: 10.1073/pnas.80.9.2544.
In vitro comparison of initiation properties of bacteriophage lambda wild-type PR and x3 mutant promoters.
HAWLEY D, McClure W
Proc Natl Acad Sci U S A. 1980; 77(11):6381-5.
PMID: 6450417
PMC: 350288.
DOI: 10.1073/pnas.77.11.6381.
Oligonucleotides complementary to a promoter over the region -8...+2 as transcription primers for E. coli RNA polymerase.
Grachev M, Zaychikov E, Ivanova E, Komarova N, Kutyavin I, Sidelnikova N
Nucleic Acids Res. 1984; 12(22):8509-24.
PMID: 6390344
PMC: 320395.
DOI: 10.1093/nar/12.22.8509.
Effect of superhelicity on the transcription from the tet promoter of pBR322. Abortive initiation and unwinding experiments.
Schnarr M, Lefevre J, Daune M
Nucleic Acids Res. 1984; 12(20):7741-52.
PMID: 6387626
PMC: 320197.
DOI: 10.1093/nar/12.20.7741.