How Does Independent Component Analysis Preprocessing Affect EEG Microstates?

Over recent years, electroencephalographic (EEG) microstates have been increasingly used to investigate, at a millisecond scale, the temporal dynamics of large-scale brain networks. By studying their topography and chronological sequence, microstates research has contributed to the understanding of the brain's functional organization at rest and its alteration in neurological or mental disorders. Artifact removal strategies, which differ from study to study, may alter microstates topographies and features, possibly reducing the generalizability and comparability of results across research groups. The aim of this work was therefore to test the reliability of the microstate extraction process and the stability of microstate features against different strategies of EEG data preprocessing with Independent Component Analysis (ICA) to remove artifacts embedded in the data. A normative resting state EEG dataset was used where subjects alternate eyes-open (EO) and eyes-closed (EC) periods. Four strategies were tested: (i) avoiding ICA preprocessing altogether, (ii) removing ocular artifacts only, (iii) removing all reliably identified physiological/non physiological artifacts, (iv) retaining only reliably identified brain ICs. Results show that skipping the removal of ocular artifacts affects the stability of microstate evaluation criteria, microstate topographies and greatly reduces the statistical power of EO/EC microstate features comparisons, however differences are not as prominent with more aggressive preprocessing. Provided a good-quality dataset is recorded, and ocular artifacts are removed, microstates topographies and features can capture brain-related physiological data and are robust to artifacts, independently of the level of preprocessing, paving the way to automatized microstate extraction pipelines.