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Complete Genome Sequences of the KACC 18744, KACC 18716, and KACC 19094

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Abstract

We report the whole genome sequences of KACC 18744, KACC 18716, and KACC 19094, to investigate the genomic diversity of bacterial type strains distributed in Korea.

References
1.
Tatusova T, DiCuccio M, Badretdin A, Chetvernin V, Nawrocki E, Zaslavsky L . NCBI prokaryotic genome annotation pipeline. Nucleic Acids Res. 2016; 44(14):6614-24. PMC: 5001611. DOI: 10.1093/nar/gkw569. View

2.
Hyeon J, Kim K, Son A, Choi E, Kuk Lee S, Jeon C . Novosphingobium humi sp. nov., isolated from soil of a military shooting range. Int J Syst Evol Microbiol. 2017; 67(8):3083-3088. DOI: 10.1099/ijsem.0.002089. View

3.
Bolger A, Lohse M, Usadel B . Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 2014; 30(15):2114-20. PMC: 4103590. DOI: 10.1093/bioinformatics/btu170. View

4.
Simao F, Waterhouse R, Ioannidis P, Kriventseva E, Zdobnov E . BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs. Bioinformatics. 2015; 31(19):3210-2. DOI: 10.1093/bioinformatics/btv351. View

5.
Hunt M, De Silva N, Otto T, Parkhill J, Keane J, Harris S . Circlator: automated circularization of genome assemblies using long sequencing reads. Genome Biol. 2015; 16:294. PMC: 4699355. DOI: 10.1186/s13059-015-0849-0. View