6.
PONTIUS J, RICHELLE J, Wodak S
. Deviations from standard atomic volumes as a quality measure for protein crystal structures. J Mol Biol. 1996; 264(1):121-36.
DOI: 10.1006/jmbi.1996.0628.
View
7.
Papaleo E, Mereghetti P, Fantucci P, Grandori R, De Gioia L
. Free-energy landscape, principal component analysis, and structural clustering to identify representative conformations from molecular dynamics simulations: the myoglobin case. J Mol Graph Model. 2009; 27(8):889-99.
DOI: 10.1016/j.jmgm.2009.01.006.
View
8.
Miranda-Blancas R, Rodriguez-Lima O, Garcia-Gutierrez P, Flores-Lopez R, Jimenez L, Zubillaga R
. Biochemical characterization and gene structure analysis of the 24-kDa glutathione transferase sigma from Taenia solium. FEBS Open Bio. 2024; 14(5):726-739.
PMC: 11073501.
DOI: 10.1002/2211-5463.13795.
View
9.
Amaro R, Baudry J, Chodera J, Demir O, McCammon J, Miao Y
. Ensemble Docking in Drug Discovery. Biophys J. 2018; 114(10):2271-2278.
PMC: 6129458.
DOI: 10.1016/j.bpj.2018.02.038.
View
10.
Chen H, Engkvist O, Wang Y, Olivecrona M, Blaschke T
. The rise of deep learning in drug discovery. Drug Discov Today. 2018; 23(6):1241-1250.
DOI: 10.1016/j.drudis.2018.01.039.
View
11.
Flanagan J, Smythe M
. Sigma-class glutathione transferases. Drug Metab Rev. 2011; 43(2):194-214.
DOI: 10.3109/03602532.2011.560157.
View
12.
Vibanco-Perez N, Jimenez L, Mendoza-Hernandez G, Landa A
. Characterization of a recombinant mu-class glutathione S-transferase from Taenia solium. Parasitol Res. 2002; 88(5):398-404.
DOI: 10.1007/s00436-001-0580-5.
View
13.
Raman E, Yu W, Guvench O, MacKerell A
. Reproducing crystal binding modes of ligand functional groups using Site-Identification by Ligand Competitive Saturation (SILCS) simulations. J Chem Inf Model. 2011; 51(4):877-96.
PMC: 3090225.
DOI: 10.1021/ci100462t.
View
14.
Sun Y, Kuan I, Tam M, Hsiao C
. The three-dimensional structure of an avian class-mu glutathione S-transferase, cGSTM1-1 at 1.94 A resolution. J Mol Biol. 1998; 278(1):239-52.
DOI: 10.1006/jmbi.1998.1716.
View
15.
Bowie J, Luthy R, Eisenberg D
. A method to identify protein sequences that fold into a known three-dimensional structure. Science. 1991; 253(5016):164-70.
DOI: 10.1126/science.1853201.
View
16.
Sanchez Perez L, Zubillaga R, Garcia-Gutierrez P, Landa A
. Sigma-Class Glutathione Transferases (GSTσ): A New Target with Potential for Helminth Control. Trop Med Infect Dis. 2024; 9(4).
PMC: 11053550.
DOI: 10.3390/tropicalmed9040085.
View
17.
Hayes J, Flanagan J, Jowsey I
. Glutathione transferases. Annu Rev Pharmacol Toxicol. 2005; 45:51-88.
DOI: 10.1146/annurev.pharmtox.45.120403.095857.
View
18.
Eberhardt J, Santos-Martins D, Tillack A, Forli S
. AutoDock Vina 1.2.0: New Docking Methods, Expanded Force Field, and Python Bindings. J Chem Inf Model. 2021; 61(8):3891-3898.
PMC: 10683950.
DOI: 10.1021/acs.jcim.1c00203.
View
19.
Huang S, Zou X
. Ensemble docking of multiple protein structures: considering protein structural variations in molecular docking. Proteins. 2006; 66(2):399-421.
DOI: 10.1002/prot.21214.
View
20.
Pascovici D, Handler D, Wu J, Haynes P
. Multiple testing corrections in quantitative proteomics: A useful but blunt tool. Proteomics. 2016; 16(18):2448-53.
DOI: 10.1002/pmic.201600044.
View