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Plasmid-encoded Phosphatase RapP Enhances Cell Growth in Non-domesticated Bacillus Subtilis Strains

Overview
Journal Nat Commun
Specialty Biology
Date 2024 Nov 5
PMID 39500898
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Abstract

The trade-off between rapid growth and other important physiological traits (e.g., survival and adaptability) poses a fundamental challenge for microbes to achieve fitness maximization. Studies on Bacillus subtilis biology often use strains derived after a process of lab 'domestication' from an ancestral strain known as Marburg strain. The domestication process led to loss of a large plasmid (pBS32) encoding a phosphatase (RapP) that dephosphorylates the Spo0F protein and thus regulates biofilm formation and sporulation. Here, we show that plasmid pBS32, and more specifically rapP, enhance growth rates by preventing premature expression of the Spo0F-Spo0A-mediated adaptive response during exponential phase. This results in reallocation of proteome resources towards biosynthetic, growth-promoting pathways without compromising long-term fitness during stationary phase. Thus, RapP helps B. subtilis to constrain physiological trade-offs and economize cellular resources for fitness improvement.

References
1.
Simsek E, Kim M . The emergence of metabolic heterogeneity and diverse growth responses in isogenic bacterial cells. ISME J. 2018; 12(5):1199-1209. PMC: 5932066. DOI: 10.1038/s41396-017-0036-2. View

2.
Ellermeier C, Hobbs E, Gonzalez-Pastor J, Losick R . A three-protein signaling pathway governing immunity to a bacterial cannibalism toxin. Cell. 2006; 124(3):549-59. DOI: 10.1016/j.cell.2005.11.041. View

3.
Zhu M, Mu H, Dai X . Integrated control of bacterial growth and stress response by (p)ppGpp in : A seesaw fashion. iScience. 2024; 27(2):108818. PMC: 10828813. DOI: 10.1016/j.isci.2024.108818. View

4.
Nordgaard M, Mortensen R, Kirk N, Gallegos-Monterrosa R, Kovacs A . Deletion of Rap-Phr systems in Bacillus subtilis influences in vitro biofilm formation and plant root colonization. Microbiologyopen. 2021; 10(3):e1212. PMC: 8236291. DOI: 10.1002/mbo3.1212. View

5.
Wu C, Mori M, Abele M, Banaei-Esfahani A, Zhang Z, Okano H . Enzyme expression kinetics by Escherichia coli during transition from rich to minimal media depends on proteome reserves. Nat Microbiol. 2023; 8(2):347-359. PMC: 9994330. DOI: 10.1038/s41564-022-01310-w. View