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Phylogenomic Insights into Neotropical Relationships

Abstract

Despite extensive research into the phylogenetic relationships of the genus , Neotropical taxa have been neglected. This is partly because their numbers have recently doubled and now account for almost half of the global richness. Therefore, by sampling one-third of all Neotropical taxa their relationships were studied using morphological, nuclear, and plastome data. Two major clades were identified: Clade I, comprising sect. sect. from the Neotropics, and the Asian sect. ; while Clade II included the Neotropical clades sect. and sect. , along with the remaining non-Neotropical sections. Within Clade I, sect. was geographically divided into a northern subclade grouping Mexican and Central American taxa, and a southern subclade comprising South American and Caribbean taxa. sect. was also dichotomously divided, corresponding to the former sect. subsect. and sect. subsect. . In Clade II, the relationships within sect. and sect. were unclear, suggesting a species complex in all sect. taxa. In total, 25 morphological traits were assessed, and ancestral state reconstructions were carried out. Only the joined clustering of mature follicles was a synapomorphy for the southern subclade of sect. . In conclusion, this highlights the need to re-assess the taxonomic delimitation of certain groups, to update the infrageneric classification of Neotropical clades and to explore morphological traits to support them.

References
1.
Li H, Durbin R . Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics. 2009; 25(14):1754-60. PMC: 2705234. DOI: 10.1093/bioinformatics/btp324. View

2.
Veltjen E, Teste E, Palmarola Bejerano A, Asselman P, Hernandez Rodriguez M, Roberto Gonzalez Torres L . The evolutionary history of the Caribbean magnolias (Magnoliaceae): Testing species delimitations and biogeographical hypotheses using molecular data. Mol Phylogenet Evol. 2021; 167:107359. DOI: 10.1016/j.ympev.2021.107359. View

3.
Yang L, Tian J, Xu L, Zhao X, Song Y, Wang D . Comparative Chloroplast Genomes of Six Magnoliaceae Species Provide New Insights into Intergeneric Relationships and Phylogeny. Biology (Basel). 2022; 11(9). PMC: 9495354. DOI: 10.3390/biology11091279. View

4.
Stull G, Soltis P, Soltis D, Gitzendanner M, Smith S . Nuclear phylogenomic analyses of asterids conflict with plastome trees and support novel relationships among major lineages. Am J Bot. 2020; 107(5):790-805. DOI: 10.1002/ajb2.1468. View

5.
Rodriguez-Ramirez E, Garcia-Morales L, Alcantara-Ayala O, Vazquez-Garcia J, Luna-Vega I . Leaf Vein Morphological Variation in Four Endangered Neotropical Species along an Elevation Gradient in the Mexican Tropical Montane Cloud Forests. Plants (Basel). 2021; 10(12). PMC: 8703730. DOI: 10.3390/plants10122595. View