» Articles » PMID: 39459879

First Detection and Characterization of in the Human Vagina in Two Sequential Samples over a Twelve-Day Interval

Abstract

Background: is a CRESS-DNA virus identified almost exclusively in transient fecal samples from various vertebrate species.

Objective: We evaluated human vaginal samples for the presence and maintenance of .

Methods: Viral metagenomics analysis was performed on vaginal samples collected from 28 apparently healthy women in New York City, USA. Twenty-one of the women provided duplicate samples over a 12-21-day interval.

Results: Phylogenetic analysis identified two samples from the same individual, collected over a twelve-day interval, that were positive for the complete genome. All detected sequence contigs belonged to a single variant of CRESS-DNA.

Conclusions: The continuous presence of in the human vagina over a twelve-day period was identified.

References
1.
Ng T, Zhang W, Sachsenroder J, Kondov N, da Costa A, Vega E . A diverse group of small circular ssDNA viral genomes in human and non-human primate stools. Virus Evol. 2016; 1(1):vev017. PMC: 5014484. DOI: 10.1093/ve/vev017. View

2.
Diez-Villasenor C, Rodriguez-Valera F . CRISPR analysis suggests that small circular single-stranded DNA smacoviruses infect Archaea instead of humans. Nat Commun. 2019; 10(1):294. PMC: 6336856. DOI: 10.1038/s41467-018-08167-w. View

3.
El Aila N, Tency I, Claeys G, Verstraelen H, Saerens B, Lopes Dos Santos Santiago G . Identification and genotyping of bacteria from paired vaginal and rectal samples from pregnant women indicates similarity between vaginal and rectal microflora. BMC Infect Dis. 2009; 9:167. PMC: 2770471. DOI: 10.1186/1471-2334-9-167. View

4.
Deng X, Naccache S, Ng T, Federman S, Li L, Chiu C . An ensemble strategy that significantly improves de novo assembly of microbial genomes from metagenomic next-generation sequencing data. Nucleic Acids Res. 2015; 43(7):e46. PMC: 4402509. DOI: 10.1093/nar/gkv002. View

5.
Da Costa A, Bortoletto P, Spandorfer S, Tozetto-Mendoza T, Linhares I, Mendes-Correa M . Association between torquetenovirus in vaginal secretions and infertility: An exploratory metagenomic analysis. Am J Reprod Immunol. 2023; 90(5):e13788. DOI: 10.1111/aji.13788. View