» Articles » PMID: 39339962

Extensive Diversity of Viruses in Millipedes Collected in the Dong Nai Biosphere Reserve (Vietnam)

Overview
Journal Viruses
Publisher MDPI
Specialty Microbiology
Date 2024 Sep 28
PMID 39339962
Authors
Affiliations
Soon will be listed here.
Abstract

Advances in sequencing technologies and bioinformatics have led to breakthroughs in the study of virus biodiversity. Millipedes (Diplopoda, Myriapoda, Arthropoda) include more than 12,000 extant species, yet data on virus diversity in Diplopoda are scarce. This study aimed to explore the virome of the millipedes collected in the Dong Nai Biosphere Reserve in Vietnam. We studied 14 species of millipedes and managed to assemble and annotate the complete coding genomes of 16 novel viruses, the partial coding genomes of 10 more viruses, and several fragmented viral sequences, which may indicate the presence of about 54 more viruses in the studied samples. Among the complete and partial genomes, 27% were putative members of the order . Most of the discovered viruses were very distant from the viruses currently present in the relevant databases. At least eight viruses meet the criteria to be recognized as a new species by the International Committee on Taxonomy of Viruses, and, for two of them, a higher taxonomic status (genus and even family) can be suggested.

References
1.
Wolf Y, Koonin E, Krupovic M, Kuhn J . ICTV Virus Taxonomy Profile: 2023. J Gen Virol. 2023; 104(10). PMC: 10721934. DOI: 10.1099/jgv.0.001905. View

2.
Hameed M, Wahaab A, Shan T, Wang X, Khan S, Di D . A Metagenomic Analysis of Mosquito Virome Collected From Different Animal Farms at Yunnan-Myanmar Border of China. Front Microbiol. 2021; 11:591478. PMC: 7898981. DOI: 10.3389/fmicb.2020.591478. View

3.
Kuhn J, Alkhovsky S, Avsic-Zupanc T, Bergeron E, Burt F, Ergunay K . ICTV Virus Taxonomy Profile: 2024. J Gen Virol. 2024; 105(4). PMC: 11094370. DOI: 10.1099/jgv.0.001974. View

4.
Sharpe S, Paraskevopoulou S . ICTV Virus Taxonomy Profile: 2023. J Gen Virol. 2023; 104(10). DOI: 10.1099/jgv.0.001906. View

5.
Van Eynde B, Christiaens O, Delbare D, Shi C, Vanhulle E, Yinda C . Exploration of the virome of the European brown shrimp (). J Gen Virol. 2020; 101(6):651-666. DOI: 10.1099/jgv.0.001412. View