» Articles » PMID: 39339886

New Viruses Infecting Hyperthermophilic Bacterium

Overview
Journal Viruses
Publisher MDPI
Specialty Microbiology
Date 2024 Sep 28
PMID 39339886
Authors
Affiliations
Soon will be listed here.
Abstract

Highly diverse phages infecting thermophilic bacteria of the genus have been isolated over the years from hot springs around the world. Many of these phages are unique, rely on highly unusual developmental strategies, and encode novel enzymes. The variety of phages is clearly undersampled, as evidenced, for example, by a paucity of phage-matching spacers in CRISPR arrays. Using water samples collected from hot springs in the Kunashir Island from the Kuril archipelago and from the Tsaishi and Nokalakevi districts in the Republic of Georgia, we isolated several distinct phages infecting laboratory strains of . Genomic sequence analysis of 11 phages revealed both close relatives of previously described phages isolated from geographically distant sites, as well as phages with very limited similarity to earlier isolates. Comparative analysis allowed us to predict several accessory phage genes whose products may be involved in host defense/interviral warfare, including a putative Type V CRISPR- system.

References
1.
Hutinet G, Swarjo M, de Crecy-Lagard V . Deazaguanine derivatives, examples of crosstalk between RNA and DNA modification pathways. RNA Biol. 2016; 14(9):1175-1184. PMC: 5699537. DOI: 10.1080/15476286.2016.1265200. View

2.
Medvedeva S, Sun J, Yutin N, Koonin E, Nunoura T, Rinke C . Three families of Asgard archaeal viruses identified in metagenome-assembled genomes. Nat Microbiol. 2022; 7(7):962-973. PMC: 11165672. DOI: 10.1038/s41564-022-01144-6. View

3.
Piya D, Vara L, Russell W, Young R, Gill J . The multicomponent antirestriction system of phage P1 is linked to capsid morphogenesis. Mol Microbiol. 2017; 105(3):399-412. PMC: 6011833. DOI: 10.1111/mmi.13705. View

4.
Medvedeva S, Brandt D, Cvirkaite-Krupovic V, Liu Y, Severinov K, Ishino S . New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae. Environ Microbiol. 2021; 23(8):4612-4630. DOI: 10.1111/1462-2920.15654. View

5.
Gray C, Brown R, Marvin D . Adsorption complex of filamentous fd virus. J Mol Biol. 1981; 146(4):621-7. DOI: 10.1016/0022-2836(81)90050-4. View