» Articles » PMID: 39283312

Spin Dynamics of Radical Pairs Using the Stochastic Schrödinger Equation in

Overview
Specialties Biochemistry
Chemistry
Date 2024 Sep 16
PMID 39283312
Authors
Affiliations
Soon will be listed here.
Abstract

The chemical reactivity of radical pairs is strongly influenced by the interactions of electronic and nuclear spins. A detailed understanding of these effects requires a quantum description of the spin dynamics that considers spin-dependent reaction rates, interactions with external magnetic fields, spin-spin interactions, and the loss of spin coherence caused by coupling to a fluctuating environment. Modeling real chemical and biochemical systems, which frequently involve radicals with multinuclear spin systems, poses a severe computational challenge. Here, we implement a method based on the stochastic Schrödinger equation in the software package . Large electron-nuclear spin systems can be simulated efficiently, with asymmetric spin-selective recombination reactions, anisotropic hyperfine interactions, and nonzero exchange and dipolar couplings. Spin-relaxation can be modeled using the stochastic time-dependence of spin interactions determined by molecular dynamics and quantum chemical calculations or by allowing rate coefficients to be explicitly time-dependent. The flexibility afforded by this approach opens new avenues for exploring the effects of complex molecular motions on the spin dynamics of chemical transformations.

References
1.
Hiscock H, Worster S, Kattnig D, Steers C, Jin Y, Manolopoulos D . The quantum needle of the avian magnetic compass. Proc Natl Acad Sci U S A. 2016; 113(17):4634-9. PMC: 4855607. DOI: 10.1073/pnas.1600341113. View

2.
Hore P, Mouritsen H . The Radical-Pair Mechanism of Magnetoreception. Annu Rev Biophys. 2016; 45:299-344. DOI: 10.1146/annurev-biophys-032116-094545. View

3.
Hiscock H, Mouritsen H, Manolopoulos D, Hore P . Disruption of Magnetic Compass Orientation in Migratory Birds by Radiofrequency Electromagnetic Fields. Biophys J. 2017; 113(7):1475-1484. PMC: 5627152. DOI: 10.1016/j.bpj.2017.07.031. View

4.
Kattnig D, Solovyov I, Hore P . Electron spin relaxation in cryptochrome-based magnetoreception. Phys Chem Chem Phys. 2016; 18(18):12443-56. DOI: 10.1039/c5cp06731f. View

5.
Nielsen C, Solovyov I . MolSpin-Flexible and extensible general spin dynamics software. J Chem Phys. 2019; 151(19):194105. DOI: 10.1063/1.5125043. View