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D4Z4 Hypomethylation in Human Germ Cells

Overview
Journal Cells
Publisher MDPI
Date 2024 Sep 14
PMID 39273067
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Abstract

Expression of the double homeobox 4 () transcription factor is highly regulated in early embryogenesis and is subsequently epigenetically silenced. Ectopic expression of due to hypomethylation of the D4Z4 repeat array on permissive chromosome 4q35 alleles is associated with facioscapulohumeral muscular dystrophy (FSHD). In peripheral blood samples from 188 healthy individuals, D4Z4 methylation was highly variable, ranging from 19% to 76%, and was not affected by age. In 48 FSHD2 patients, D4Z4 methylation varied from 3% to 30%. Given that is one of the earliest transcribed genes after fertilization, the D4Z4 array is expected to be unmethylated in mature germ cells. Deep bisulfite sequencing of 188 mainly normozoospermic sperm samples revealed an average methylation of 2.5% (range 0.3-22%). Overall, the vast majority (78%) of individual sperm cells displayed no methylation at all. In contrast, only 19 (17.5%) of 109 individual germinal vesicle (GV) oocytes displayed D4Z4 methylation <2.5%. However, it is not unexpected that immature GV oocytes which are not usable for assisted reproduction are endowed with D4Z4 (up to 74%) hypermethylation and/or abnormal ( and ) imprints. Although not significant, it is interesting to note that the pregnancy rate after assisted reproduction was higher for donors of sperm samples and oocytes with <2.5% methylation.

References
1.
Smith Z, Chan M, Mikkelsen T, Gu H, Gnirke A, Regev A . A unique regulatory phase of DNA methylation in the early mammalian embryo. Nature. 2012; 484(7394):339-44. PMC: 3331945. DOI: 10.1038/nature10960. View

2.
Mocciaro E, Runfola V, Ghezzi P, Pannese M, Gabellini D . DUX4 Role in Normal Physiology and in FSHD Muscular Dystrophy. Cells. 2021; 10(12). PMC: 8699294. DOI: 10.3390/cells10123322. View

3.
Leitao E, Beygo J, Zeschnigk M, Klein-Hitpass L, Bargull M, Rahmann S . Locus-Specific DNA Methylation Analysis by Targeted Deep Bisulfite Sequencing. Methods Mol Biol. 2018; 1767:351-366. DOI: 10.1007/978-1-4939-7774-1_19. View

4.
EMERY A . Population frequencies of inherited neuromuscular diseases--a world survey. Neuromuscul Disord. 1991; 1(1):19-29. DOI: 10.1016/0960-8966(91)90039-u. View

5.
Daxinger L, Tapscott S, van der Maarel S . Genetic and epigenetic contributors to FSHD. Curr Opin Genet Dev. 2015; 33:56-61. PMC: 4674299. DOI: 10.1016/j.gde.2015.08.007. View