Evaluation of the Crosstalk Between the Host Mycobiome and Bacteriome in Patients with Chronic Pancreatitis

Overview

Journal Indian J Microbiol

Specialty Microbiology

Date 2024 Jul 16

PMID 39011022

Authors

Priyanka Sarkar

Sreelekha Chintaluri

Subhaleena Sarkar

Misbah Unnisa

Aparna Jakkampudi

Ambika Prasanna Mulukutla

Sneha Kumari

D Nageshwar Reddy

Rupjyoti Talukdar

Affiliations

Soon will be listed here.

Abstract

Supplementary Information: The online version contains supplementary material available at 10.1007/s12088-024-01207-8.

References

Koziel K, Urbanska E . Kynurenine Pathway in Diabetes Mellitus-Novel Pharmacological Target?. Cells. 2023; 12(3). PMC: 9913876. DOI: 10.3390/cells12030460. View

Sarkar S, Sarkar P, M R, Hazarika D, Prasanna A, Pandol S . Pain, depression, and poor quality of life in chronic pancreatitis: Relationship with altered brain metabolites. Pancreatology. 2022; 22(6):688-697. DOI: 10.1016/j.pan.2022.06.007. View

Popov J, Strikwerda A, Gubbay J, Pai N . bacteremia post-ERCP and cholecystectomy in a pediatric patient: A case report. J Assoc Med Microbiol Infect Dis Can. 2022; 4(3):182-186. PMC: 9603030. DOI: 10.3138/jammi.2018-0027. View

Sarkar P, Kandimalla R, Bhattacharya A, Wahengbam R, Dehingia M, Chandra Kalita M . Multi-Omics Analysis Demonstrates the Critical Role of Non-Ethanolic Components of Alcoholic Beverages in the Host Microbiome and Metabolome: A Human- and Animal-Based Study. Microorganisms. 2023; 11(6). PMC: 10301968. DOI: 10.3390/microorganisms11061501. View

Friedman M . Analysis, Nutrition, and Health Benefits of Tryptophan. Int J Tryptophan Res. 2018; 11:1178646918802282. PMC: 6158605. DOI: 10.1177/1178646918802282. View

Erb Downward J, Falkowski N, Mason K, Muraglia R, Huffnagle G . Modulation of post-antibiotic bacterial community reassembly and host response by Candida albicans. Sci Rep. 2013; 3:2191. PMC: 3709164. DOI: 10.1038/srep02191. View

Pang Z, Zhou G, Ewald J, Chang L, Hacariz O, Basu N . Using MetaboAnalyst 5.0 for LC-HRMS spectra processing, multi-omics integration and covariate adjustment of global metabolomics data. Nat Protoc. 2022; 17(8):1735-1761. DOI: 10.1038/s41596-022-00710-w. View

den Besten G, van Eunen K, Groen A, Venema K, Reijngoud D, Bakker B . The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism. J Lipid Res. 2013; 54(9):2325-40. PMC: 3735932. DOI: 10.1194/jlr.R036012. View

Langille M, Zaneveld J, Caporaso J, McDonald D, Knights D, Reyes J . Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat Biotechnol. 2013; 31(9):814-21. PMC: 3819121. DOI: 10.1038/nbt.2676. View

10.

Akshintala V, Talukdar R, Singh V, Goggins M . The Gut Microbiome in Pancreatic Disease. Clin Gastroenterol Hepatol. 2018; 17(2):290-295. PMC: 6314887. DOI: 10.1016/j.cgh.2018.08.045. View

11.

Pemmaraju S, Pruthi P, Prasad R, Pruthi V . Modulation of Candida albicans Biofilm by Different Carbon Sources. Mycopathologia. 2016; 181(5-6):341-52. DOI: 10.1007/s11046-016-9992-8. View

12.

Pushalkar S, Hundeyin M, Daley D, Zambirinis C, Kurz E, Mishra A . The Pancreatic Cancer Microbiome Promotes Oncogenesis by Induction of Innate and Adaptive Immune Suppression. Cancer Discov. 2018; 8(4):403-416. PMC: 6225783. DOI: 10.1158/2159-8290.CD-17-1134. View

13.

Kothavade R, Kura M, Valand A, Panthaki M . Candida tropicalis: its prevalence, pathogenicity and increasing resistance to fluconazole. J Med Microbiol. 2010; 59(Pt 8):873-880. DOI: 10.1099/jmm.0.013227-0. View

14.

Schaefer K, Wagener J, Ames R, Christou S, MacCallum D, Bates S . Three Related Enzymes in Candida albicans Achieve Arginine- and Agmatine-Dependent Metabolism That Is Essential for Growth and Fungal Virulence. mBio. 2020; 11(4). PMC: 7439472. DOI: 10.1128/mBio.01845-20. View

15.

Jandhyala S, Talukdar R, Subramanyam C, Vuyyuru H, Sasikala M, Reddy D . Role of the normal gut microbiota. World J Gastroenterol. 2015; 21(29):8787-803. PMC: 4528021. DOI: 10.3748/wjg.v21.i29.8787. View

16.

Spiegelhauer M, Yusibova M, Rasmussen I, Fuglsang K, Thomsen K, Andersen L . A case report of polymicrobial bacteremia with and comparison of previous treatment for successful recovery with a review of the literature. Access Microbiol. 2020; 2(5):acmi000119. PMC: 7494186. DOI: 10.1099/acmi.0.000119. View

17.

Karnovsky A, Weymouth T, Hull T, Tarcea V, Scardoni G, Laudanna C . Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data. Bioinformatics. 2011; 28(3):373-80. PMC: 3268237. DOI: 10.1093/bioinformatics/btr661. View

18.

Capurso G, Signoretti M, Archibugi L, Stigliano S, Delle Fave G . Systematic review and meta-analysis: Small intestinal bacterial overgrowth in chronic pancreatitis. United European Gastroenterol J. 2016; 4(5):697-705. PMC: 5042309. DOI: 10.1177/2050640616630117. View

19.

Pulipati P, Sarkar P, Jakkampudi A, Kaila V, Sarkar S, Unnisa M . The Indian gut microbiota-Is it unique?. Indian J Gastroenterol. 2020; 39(2):133-140. DOI: 10.1007/s12664-020-01037-8. View

20.

Nilsson R, Larsson K, Taylor A, Bengtsson-Palme J, Jeppesen T, Schigel D . The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications. Nucleic Acids Res. 2018; 47(D1):D259-D264. PMC: 6324048. DOI: 10.1093/nar/gky1022. View