» Articles » PMID: 39001510

Integrating Omics Data and AI for Cancer Diagnosis and Prognosis

Overview
Journal Cancers (Basel)
Publisher MDPI
Specialty Oncology
Date 2024 Jul 13
PMID 39001510
Authors
Affiliations
Soon will be listed here.
Abstract

Cancer is one of the leading causes of death, making timely diagnosis and prognosis very important. Utilization of AI (artificial intelligence) enables providers to organize and process patient data in a way that can lead to better overall outcomes. This review paper aims to look at the varying uses of AI for diagnosis and prognosis and clinical utility. PubMed and EBSCO databases were utilized for finding publications from 1 January 2020 to 22 December 2023. Articles were collected using key search terms such as "artificial intelligence" and "machine learning." Included in the collection were studies of the application of AI in determining cancer diagnosis and prognosis using multi-omics data, radiomics, pathomics, and clinical and laboratory data. The resulting 89 studies were categorized into eight sections based on the type of data utilized and then further subdivided into two subsections focusing on cancer diagnosis and prognosis, respectively. Eight studies integrated more than one form of omics, namely genomics, transcriptomics, epigenomics, and proteomics. Incorporating AI into cancer diagnosis and prognosis alongside omics and clinical data represents a significant advancement. Given the considerable potential of AI in this domain, ongoing prospective studies are essential to enhance algorithm interpretability and to ensure safe clinical integration.

Citing Articles

AI-driven biomarker discovery: enhancing precision in cancer diagnosis and prognosis.

Alum E Discov Oncol. 2025; 16(1):313.

PMID: 40082367 PMC: 11906928. DOI: 10.1007/s12672-025-02064-7.


Integrating AI into Cancer Immunotherapy-A Narrative Review of Current Applications and Future Directions.

Olawade D, Clement David-Olawade A, Adereni T, Egbon E, Teke J, Boussios S Diseases. 2025; 13(1).

PMID: 39851488 PMC: 11764268. DOI: 10.3390/diseases13010024.


Mechanisms and technologies in cancer epigenetics.

Sherif Z, Ogunwobi O, Ressom H Front Oncol. 2025; 14:1513654.

PMID: 39839798 PMC: 11746123. DOI: 10.3389/fonc.2024.1513654.


Impact of Metabolites from Foodborne Pathogens on Cancer.

Mafe A, Busselberg D Foods. 2024; 13(23).

PMID: 39682958 PMC: 11640045. DOI: 10.3390/foods13233886.


Artificial Intelligence-Driven Computational Approaches in the Development of Anticancer Drugs.

Garg P, Singhal G, Kulkarni P, Horne D, Salgia R, Singhal S Cancers (Basel). 2024; 16(22).

PMID: 39594838 PMC: 11593155. DOI: 10.3390/cancers16223884.


References
1.
Yu P, Wu X, Li J, Mao N, Zhang H, Zheng G . Extrathyroidal Extension Prediction of Papillary Thyroid Cancer With Computed Tomography Based Radiomics Nomogram: A Multicenter Study. Front Endocrinol (Lausanne). 2022; 13:874396. PMC: 9198261. DOI: 10.3389/fendo.2022.874396. View

2.
Carrillo-Perez F, Ortuno F, Borjesson A, Rojas I, Herrera L . Performance comparison between multi-center histopathology datasets of a weakly-supervised deep learning model for pancreatic ductal adenocarcinoma detection. Cancer Imaging. 2023; 23(1):66. PMC: 10294485. DOI: 10.1186/s40644-023-00586-3. View

3.
Hasin Y, Seldin M, Lusis A . Multi-omics approaches to disease. Genome Biol. 2017; 18(1):83. PMC: 5418815. DOI: 10.1186/s13059-017-1215-1. View

4.
Jin Y, Lan A, Dai Y, Jiang L, Liu S . Development and testing of a random forest-based machine learning model for predicting events among breast cancer patients with a poor response to neoadjuvant chemotherapy. Eur J Med Res. 2023; 28(1):394. PMC: 10543332. DOI: 10.1186/s40001-023-01361-7. View

5.
Owens A, McInerney C, Prise K, McArt D, Jurek-Loughrey A . Novel deep learning-based solution for identification of prognostic subgroups in liver cancer (Hepatocellular carcinoma). BMC Bioinformatics. 2021; 22(1):563. PMC: 8611905. DOI: 10.1186/s12859-021-04454-4. View