The Impact of Consanguinity on the Design of IPSC Banks
Overview
Overview
Journal
Stem Cell Reports
Publisher
Cell Press
Specialty
Cell Biology
Date
2024 Jul 12
PMID
38996491
Authors
Authors
Affiliations
Affiliations
Soon will be listed here.
Abstract
The effect of consanguinity on identifying universal induced pluripotent stem cell (iPSC) donors, i.e., homozygous for the major human leukocyte antigen (HLA) loci, is unknown. The discovery sample size was calculated in a consanguineous population using a method (1qF) based on the inbreeding coefficient. The result was orders of magnitude smaller compared to the standard method.
References
1.
Alfraih F, Alawwami M, Aljurf M, AlHumaidan H, AlSaedi H, El Fakih R
. High-resolution HLA allele and haplotype frequencies of the Saudi Arabian population based on 45,457 individuals and corresponding stem cell donor matching probabilities. Hum Immunol. 2021; 82(2):97-102.
DOI: 10.1016/j.humimm.2020.12.006.
View
2.
Clancy J, Hyvarinen K, Ritari J, Wahlfors T, Partanen J, Koskela S
. Blood donor biobank and HLA imputation as a resource for HLA homozygous cells for therapeutic and research use. Stem Cell Res Ther. 2022; 13(1):502.
PMC: 9549658.
DOI: 10.1186/s13287-022-03182-7.
View
3.
Simpson A, Hewitt A, Fairfax K
. Universal cell donor lines: A review of the current research. Stem Cell Reports. 2023; 18(11):2038-2046.
PMC: 10679649.
DOI: 10.1016/j.stemcr.2023.09.010.
View
4.
Taylor C, Bolton E, Pocock S, Sharples L, Pedersen R, Bradley J
. Banking on human embryonic stem cells: estimating the number of donor cell lines needed for HLA matching. Lancet. 2005; 366(9502):2019-25.
DOI: 10.1016/S0140-6736(05)67813-0.
View
5.
Schweitzer J, Song B, Herrington T, Park T, Lee N, Ko S
. Personalized iPSC-Derived Dopamine Progenitor Cells for Parkinson's Disease. N Engl J Med. 2020; 382(20):1926-1932.
PMC: 7288982.
DOI: 10.1056/NEJMoa1915872.
View