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Probing Chromatin Condensation Dynamics in Live Cells Using Interferometric Scattering Correlation Spectroscopy

Overview
Journal Commun Biol
Specialty Biology
Date 2024 Jun 24
PMID 38914653
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Abstract

Chromatin organization and dynamics play important roles in governing the regulation of nuclear processes of biological cells. However, due to the constant diffusive motion of chromatin, examining chromatin nanostructures in living cells has been challenging. In this study, we introduce interferometric scattering correlation spectroscopy (iSCORS) to spatially map nanoscopic chromatin configurations within unlabeled live cell nuclei. This label-free technique captures time-varying linear scattering signals generated by the motion of native chromatin on a millisecond timescale, allowing us to deduce chromatin condensation states. Using iSCORS imaging, we quantitatively examine chromatin dynamics over extended periods, revealing spontaneous fluctuations in chromatin condensation and heterogeneous compaction levels in interphase cells, independent of cell phases. Moreover, we observe changes in iSCORS signals of chromatin upon transcription inhibition, indicating that iSCORS can probe nanoscopic chromatin structures and dynamics associated with transcriptional activities. Our scattering-based optical microscopy, which does not require labeling, serves as a powerful tool for visualizing dynamic chromatin nano-arrangements in live cells. This advancement holds promise for studying chromatin remodeling in various crucial cellular processes, such as stem cell differentiation, mechanotransduction, and DNA repair.

Citing Articles

Rethinking chromatin accessibility: from compaction to dynamic interactions.

Fillot T, Mazza D Curr Opin Genet Dev. 2024; 90:102299.

PMID: 39705880 PMC: 11793080. DOI: 10.1016/j.gde.2024.102299.

References
1.
Nishio I, Peetermans J, Tanaka T . Microscope laser light scattering spectroscopy of single biological cells. Cell Biophys. 1985; 7(2):91-105. DOI: 10.1007/BF02784485. View

2.
Park Y, Diez-Silva M, Fu D, Popescu G, Choi W, Barman I . Static and dynamic light scattering of healthy and malaria-parasite invaded red blood cells. J Biomed Opt. 2010; 15(2):020506. PMC: 2862053. DOI: 10.1117/1.3369966. View

3.
Muller W, Walker D, Hager G, McNally J . Large-scale chromatin decondensation and recondensation regulated by transcription from a natural promoter. J Cell Biol. 2001; 154(1):33-48. PMC: 2196867. DOI: 10.1083/jcb.200011069. View

4.
Fejes Toth K, Knoch T, Wachsmuth M, Frank-Stohr M, Stohr M, Bacher C . Trichostatin A-induced histone acetylation causes decondensation of interphase chromatin. J Cell Sci. 2004; 117(Pt 18):4277-87. DOI: 10.1242/jcs.01293. View

5.
Hiroi T, Shibayama M . Dynamic light scattering microscope: accessing opaque samples with high spatial resolution. Opt Express. 2013; 21(17):20260-7. DOI: 10.1364/OE.21.020260. View