Retrospective Analysis to Optimize the Detection of Exon 14 Skipping Mutations in Non-Small Cell Lung Cancer
Overview
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Our study optimized ex14 skipping mutation detection by analyzing 223 Oncomine Focus Assay-positive cases using Pan Lung Cancer PCR Panel and reverse transcription (RT)-PCR. Among the 11 ex14 skipping mutation-positive cases (average read counts: 1390), 2 with Oncomine Focus Assay read counts of 2540 and 10,177 were positive on all platforms. Those with Oncomine Focus Assay read counts ranging from 179 to 612 tested negative elsewhere. Specimens with low ratios (average ratio: 0.12% for nine cases) may yield false-positive results. Our results suggested that monitoring read counts and ratios and validating the results with RT-PCR are crucial to prevent false positives.
Rivas S, Sepulveda R, Tapia I, Estay C, Soto V, Blanco A Int J Mol Sci. 2025; 25(24.
PMID: 39769478 PMC: 11677537. DOI: 10.3390/ijms252413715.