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Kinetic and Spectroscopic Investigation of the Y157F and C93G/Y157F Variants of Cysteine Dioxygenase: Dissecting the Roles of the Second-Sphere Residues C93 and Y157

Overview
Journal Biochemistry
Specialty Biochemistry
Date 2024 Jun 17
PMID 38885352
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Abstract

In mammals, l-cysteine (Cys) homeostasis is maintained by the mononuclear nonheme iron enzyme cysteine dioxygenase (CDO), which oxidizes Cys to cysteine sulfinic acid. CDO contains a rare post-translational modification, involving the formation of a thioether cross-link between a Cys residue at position 93 ( CDO numbering) and a nearby tyrosine at position 157 (Cys-Tyr cross-link). As-isolated CDO contains both the cross-linked and non-cross-linked isoforms, and formation of the Cys-Tyr cross-link during repeated enzyme turnover increases CDO's catalytic efficiency by ∼10-fold. Interestingly, while the C93G CDO variant lacks the Cys-Tyr cross-link, it is similarly active as cross-linked wild-type (WT) CDO. Alternatively, the Y157F CDO variant, which also lacks the cross-link but maintains the free thiolate at position 93, exhibits a drastically reduced catalytic efficiency. These observations suggest that the untethered thiolate moiety of C93 is detrimental to CDO activity and/or that Y157 is essential for catalysis. To further assess the roles of residues C93 and Y157, we performed a spectroscopic and kinetic characterization of Y157F CDO and the newly designed C93G/Y157F CDO variant. Our results provide evidence that the non-cross-linked C93 thiolate stabilizes a water at the sixth coordination site of Cys-bound Y157F Fe(II)CDO. A water is also present, though more weakly coordinated, in Cys-bound C93G/Y157F Fe(II)CDO. The presence of a water molecule, which must be displaced by cosubstrate O, likely makes a significant contribution to the ∼15-fold and ∼7-fold reduced catalytic efficiencies of the Y157F and C93G/Y157F CDO variants, respectively, relative to cross-linked WT CDO.

References
1.
Straganz G, Nidetzky B . Variations of the 2-His-1-carboxylate theme in mononuclear non-heme FeII oxygenases. Chembiochem. 2006; 7(10):1536-48. DOI: 10.1002/cbic.200600152. View

2.
Li J, Griffith W, Davis I, Shin I, Wang J, Li F . Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase. Nat Chem Biol. 2018; 14(9):853-860. PMC: 6103799. DOI: 10.1038/s41589-018-0085-5. View

3.
Yang Y, Brownell C, Sadrieh N, May J, Del A . Quantitative measurement of cyanide released from Prussian Blue. Clin Toxicol (Phila). 2007; 45(7):776-81. DOI: 10.1080/15563650601181562. View

4.
Blommel P, Becker K, Duvnjak P, Fox B . Enhanced bacterial protein expression during auto-induction obtained by alteration of lac repressor dosage and medium composition. Biotechnol Prog. 2007; 23(3):585-98. PMC: 2747370. DOI: 10.1021/bp070011x. View

5.
Rokhsana D, Howells A, Dooley D, Szilagyi R . Role of the Tyr-Cys cross-link to the active site properties of galactose oxidase. Inorg Chem. 2012; 51(6):3513-24. DOI: 10.1021/ic2022769. View