6.
Segata N, Haake S, Mannon P, Lemon K, Waldron L, Gevers D
. Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples. Genome Biol. 2012; 13(6):R42.
PMC: 3446314.
DOI: 10.1186/gb-2012-13-6-r42.
View
7.
Degnan B, Macfarlane G
. Arabinogalactan utilization in continuous cultures of Bifidobacterium longum: effect of co-culture with Bacteroides thetaiotaomicron. Anaerobe. 1995; 1(2):103-12.
DOI: 10.1006/anae.1995.1005.
View
8.
Wang R, Kim S, ROBERTSON L, Cerniglia C
. Development of a membrane-array method for the detection of human intestinal bacteria in fecal samples. Mol Cell Probes. 2002; 16(5):341-50.
DOI: 10.1006/mcpr.2002.0432.
View
9.
Forouhar Vajargah M, Mohamadi Yalsuyi A, Hedayati A, Faggio C
. Histopathological lesions and toxicity in common carp (Cyprinus carpio L. 1758) induced by copper nanoparticles. Microsc Res Tech. 2018; 81(7):724-729.
DOI: 10.1002/jemt.23028.
View
10.
Bokulich N, Subramanian S, Faith J, Gevers D, Gordon J, Knight R
. Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing. Nat Methods. 2012; 10(1):57-9.
PMC: 3531572.
DOI: 10.1038/nmeth.2276.
View
11.
Edgar R, Haas B, Clemente J, Quince C, Knight R
. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics. 2011; 27(16):2194-200.
PMC: 3150044.
DOI: 10.1093/bioinformatics/btr381.
View
12.
Li X, Zhu Y, Yan Q, Ringo E, Yang D
. Do the intestinal microbiotas differ between paddlefish (Polyodon spathala) and bighead carp (Aristichthys nobilis) reared in the same pond?. J Appl Microbiol. 2014; 117(5):1245-52.
DOI: 10.1111/jam.12626.
View
13.
Ji H, Sun H, Xiong D
. Studies on activity, distribution, and zymogram of protease, α-amylase, and lipase in the paddlefish Polyodon spathula. Fish Physiol Biochem. 2011; 38(3):603-13.
DOI: 10.1007/s10695-011-9541-9.
View
14.
Guzzetti E, Sureda A, Tejada S, Faggio C
. Microplastic in marine organism: Environmental and toxicological effects. Environ Toxicol Pharmacol. 2018; 64:164-171.
DOI: 10.1016/j.etap.2018.10.009.
View
15.
Bolger A, Lohse M, Usadel B
. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 2014; 30(15):2114-20.
PMC: 4103590.
DOI: 10.1093/bioinformatics/btu170.
View
16.
Ni J, Yan Q, Yu Y, Zhang T
. Factors influencing the grass carp gut microbiome and its effect on metabolism. FEMS Microbiol Ecol. 2013; 87(3):704-14.
DOI: 10.1111/1574-6941.12256.
View
17.
Semova I, Carten J, Stombaugh J, Mackey L, Knight R, Farber S
. Microbiota regulate intestinal absorption and metabolism of fatty acids in the zebrafish. Cell Host Microbe. 2012; 12(3):277-88.
PMC: 3517662.
DOI: 10.1016/j.chom.2012.08.003.
View
18.
Edgar R
. UPARSE: highly accurate OTU sequences from microbial amplicon reads. Nat Methods. 2013; 10(10):996-8.
DOI: 10.1038/nmeth.2604.
View
19.
Ley R, Turnbaugh P, Klein S, Gordon J
. Microbial ecology: human gut microbes associated with obesity. Nature. 2006; 444(7122):1022-3.
DOI: 10.1038/4441022a.
View
20.
Magoc T, Salzberg S
. FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics. 2011; 27(21):2957-63.
PMC: 3198573.
DOI: 10.1093/bioinformatics/btr507.
View