» Articles » PMID: 38612903

Characterization of the First Secreted Sorting Nexin Identified in the Protists

Overview
Journal Int J Mol Sci
Publisher MDPI
Date 2024 Apr 13
PMID 38612903
Authors
Affiliations
Soon will be listed here.
Abstract

Proteins of the sorting nexin (SNX) family present a modular structural architecture with a phox homology (PX) phosphoinositide (PI)-binding domain and additional PX structural domains, conferring to them a wide variety of vital eukaryotic cell's functions, from signal transduction to membrane deformation and cargo binding. Although SNXs are well studied in human and yeasts, they are poorly investigated in protists. Herein, is presented the characterization of the first SNX identified in protozoan parasites encoded by the BPK_352470 gene. In silico secondary and tertiary structure prediction revealed a PX domain on the N-terminal half and a Bin/amphiphysin/Rvs (BAR) domain on the C-terminal half of this protein, with these features classifying it in the SNX-BAR subfamily of SNXs. We named the BPK_352470.1 gene product SNXi, as it is the first SNX identified in () Its expression was confirmed in promastigotes under different cell cycle phases, and it was shown to be secreted in the extracellular medium. Using an in vitro lipid binding assay, it was demonstrated that recombinant (r) SNXi (rGST-SNXi) tagged with glutathione-S-transferase (GST) binds to the PtdIns3 and PtdIns4 PIs. Using a specific a-SNXi antibody and immunofluorescence confocal microscopy, the intracellular localization of endogenous SNXi was analyzed in promastigotes and axenic amastigotes. Additionally, rSNXi tagged with enhanced green fluorescent protein (rSNXi-EGFP) was heterologously expressed in transfected HeLa cells and its localization was examined. All observed localizations suggest functions compatible with the postulated SNX identity of SNXi. Sequence, structure, and evolutionary analysis revealed high homology between SNXi and the human SNX2, while the investigation of protein-protein interactions based on STRING (v.11.5) predicted putative molecular partners of SNXi in .

Citing Articles

The role of AMPK in pancreatic cancer: from carcinogenesis to treatment.

Shahrokhi Nejad S, Razi S, Rezaei N Clin Transl Oncol. 2024; 27(1):70-82.

PMID: 38926257 DOI: 10.1007/s12094-024-03572-8.

References
1.
Ma M, Burd C . Retrograde trafficking and plasma membrane recycling pathways of the budding yeast Saccharomyces cerevisiae. Traffic. 2019; 21(1):45-59. DOI: 10.1111/tra.12693. View

2.
Horazdovsky B, Davies B, Seaman M, McLaughlin S, Yoon S, Emr S . A sorting nexin-1 homologue, Vps5p, forms a complex with Vps17p and is required for recycling the vacuolar protein-sorting receptor. Mol Biol Cell. 1997; 8(8):1529-41. PMC: 276174. DOI: 10.1091/mbc.8.8.1529. View

3.
Hanley S, Cooper K . Sorting Nexins in Protein Homeostasis. Cells. 2020; 10(1). PMC: 7823608. DOI: 10.3390/cells10010017. View

4.
Venkatesh D, Zhang N, Zoltner M, Del Pino R, Field M . Evolution of protein trafficking in kinetoplastid parasites: Complexity and pathogenesis. Traffic. 2018; 19(11):803-812. DOI: 10.1111/tra.12601. View

5.
Forrest D, Batista M, Marchini F, Tempone A, Traub-Cseko Y . Proteomic analysis of exosomes derived from procyclic and metacyclic-like cultured Leishmania infantum chagasi. J Proteomics. 2020; 227:103902. DOI: 10.1016/j.jprot.2020.103902. View