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Chalkiness and Premature Controlled by Energy Homeostasis in OsNAC02 Ko-mutant During Vegetative Endosperm Development

Overview
Journal BMC Plant Biol
Publisher Biomed Central
Specialty Biology
Date 2024 Mar 18
PMID 38494545
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Abstract

Background: Chalkiness is a common phenotype induced by various reasons, such as abiotic stress or the imbalance of starch synthesis and metabolism during the development period. However, the reason mainly for one gene losing its function such as NAC (TFs has a large family in rice) which may cause premature is rarely known to us.

Results: The Ko-Osnac02 mutant demonstrated an obviously early maturation stage compared to the wild type (WT) with 15 days earlier. The result showed that the mature endosperm of Ko-Osnac02 mutant exhibited chalkiness, characterized by white-core and white-belly in mature endosperm. As grain filling rate is a crucial factor in determining the yield and quality of rice (Oryza sativa, ssp. japonica), it's significant that mutant has a lower amylose content (AC) and higher soluble sugar content in the mature endosperm. Interestingly among the top DEGs in the RNA sequencing of N2 (3DAP) and WT seeds revealed that the OsBAM2 (LOC_Os10g32810) expressed significantly high in N2 mutant, which involved in Maltose up-regulated by the starch degradation. As Prediction of Protein interaction showed in the chalky endosperm formation in N2 seeds (3 DAP), seven genes were expressed at a lower-level which should be verified by a heatmap diagrams based on DEGs of N2 versus WT. The Tubulin genes controlling cell cycle are downregulated together with the MCM family genes MCM4 ( ↓), MCM7 ( ↑), which may cause white-core in the early endosperm development. In conclusion, the developing period drastically decreased in the Ko-Osnac02 mutants, which might cause the chalkiness in seeds during the early endosperm development.

Conclusions: The gene OsNAC02 which controls a great genetic co-network for cell cycle regulation in early development, and KO-Osnac02 mutant shows prematurity and white-core in endosperm.

References
1.
Waese J, Fan J, Pasha A, Yu H, Fucile G, Shi R . ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology. Plant Cell. 2017; 29(8):1806-1821. PMC: 5590499. DOI: 10.1105/tpc.17.00073. View

2.
Pourcel L, Routaboul J, Kerhoas L, Caboche M, Lepiniec L, Debeaujon I . TRANSPARENT TESTA10 encodes a laccase-like enzyme involved in oxidative polymerization of flavonoids in Arabidopsis seed coat. Plant Cell. 2005; 17(11):2966-80. PMC: 1276023. DOI: 10.1105/tpc.105.035154. View

3.
Yao Y, Thompson D, Guiltinan M . Maize starch-branching enzyme isoforms and amylopectin structure. In the absence of starch-branching enzyme IIb, the further absence of starch-branching enzyme Ia leads to increased branching. Plant Physiol. 2004; 136(3):3515-23. PMC: 527151. DOI: 10.1104/pp.104.043315. View

4.
Wang S, Liu L, Mi X, Zhao S, An Y, Xia X . Multi-omics analysis to visualize the dynamic roles of defense genes in the response of tea plants to gray blight. Plant J. 2021; 106(3):862-875. DOI: 10.1111/tpj.15203. View

5.
Tian Z, Qian Q, Liu Q, Yan M, Liu X, Yan C . Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities. Proc Natl Acad Sci U S A. 2009; 106(51):21760-5. PMC: 2793318. DOI: 10.1073/pnas.0912396106. View