» Articles » PMID: 38456220

Proteolytic Control of the RNA Silencing Machinery

Overview
Journal Plant Cell
Specialties Biology
Cell Biology
Date 2024 Mar 8
PMID 38456220
Authors
Affiliations
Soon will be listed here.
Abstract

Studies in plants were often pioneering in the field of RNA silencing and revealed a broad range of small RNA (sRNA) categories. When associated with ARGONAUTE (AGO) proteins, sRNAs play important functions in development, genome integrity, stress responses, and antiviral immunity. Today, most of the protein factors required for the biogenesis of sRNA classes, their amplification through the production of double-stranded RNA, and their function in transcriptional and posttranscriptional regulation have been identified. Nevertheless, and despite the importance of RNA silencing, we still know very little about their posttranslational regulation. This is in stark contrast with studies in metazoans, where different modifications such as prolyl hydroxylation, phosphorylation, sumoylation, ubiquitylation, and others have been reported to alter the activity and stability of key factors, such as AGO proteins. Here, we review current knowledge of how key components of the RNA silencing machinery in plants are regulated during development and by microbial hijacking of endogenous proteases.

Citing Articles

Focus on proteolysis.

Eckardt N, Genschik P, Jiang L, Li X, Otegui M, Sadanandom A Plant Cell. 2024; 36(9):2929-2930.

PMID: 38916930 PMC: 11371163. DOI: 10.1093/plcell/koae182.

References
1.
Lee J, Terzaghi W, Gusmaroli G, Charron J, Yoon H, Chen H . Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases. Plant Cell. 2008; 20(1):152-67. PMC: 2254929. DOI: 10.1105/tpc.107.055418. View

2.
Tong X, Liu S, Zou J, Zhao J, Zhu F, Chai L . A small peptide inhibits siRNA amplification in plants by mediating autophagic degradation of SGS3/RDR6 bodies. EMBO J. 2021; 40(15):e108050. PMC: 8327956. DOI: 10.15252/embj.2021108050. View

3.
Rogov V, Dotsch V, Johansen T, Kirkin V . Interactions between autophagy receptors and ubiquitin-like proteins form the molecular basis for selective autophagy. Mol Cell. 2014; 53(2):167-78. DOI: 10.1016/j.molcel.2013.12.014. View

4.
Rymen B, Ferrafiat L, Blevins T . Non-coding RNA polymerases that silence transposable elements and reprogram gene expression in plants. Transcription. 2020; 11(3-4):172-191. PMC: 7714444. DOI: 10.1080/21541264.2020.1825906. View

5.
Baumberger N, Baulcombe D . Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs. Proc Natl Acad Sci U S A. 2005; 102(33):11928-33. PMC: 1182554. DOI: 10.1073/pnas.0505461102. View