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Cryo-EM Structures Reveal How Phosphate Release from Arp3 Weakens Actin Filament Branches Formed by Arp2/3 Complex

Overview
Journal Nat Commun
Specialty Biology
Date 2024 Mar 6
PMID 38448439
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Abstract

Arp2/3 complex nucleates branched actin filaments for cell and organelle movements. Here we report a 2.7 Å resolution cryo-EM structure of the mature branch junction formed by S. pombe Arp2/3 complex that provides details about interactions with both mother and daughter filaments. We determine a second structure at 3.2 Å resolution with the phosphate analog BeF bound with ADP to Arp3 and ATP bound to Arp2. In this ADP-BeF transition state the outer domain of Arp3 is rotated 2° toward the mother filament compared with the ADP state and makes slightly broader contacts with actin in both the mother and daughter filaments. Thus, dissociation of P from the ADP-P transition state reduces the interactions of Arp2/3 complex with the actin filaments and may contribute to the lower mechanical stability of mature branch junctions with ADP bound to the Arps. Our structures also reveal that the mother filament in contact with Arp2/3 complex is slightly bent and twisted, consistent with the preference of Arp2/3 complex binding curved actin filaments. The small degree of twisting constrains models of actin filament mechanics.

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References
1.
Mullins R, Heuser J, Pollard T . The interaction of Arp2/3 complex with actin: nucleation, high affinity pointed end capping, and formation of branching networks of filaments. Proc Natl Acad Sci U S A. 1998; 95(11):6181-6. PMC: 27619. DOI: 10.1073/pnas.95.11.6181. View

2.
Molinie N, Gautreau A . The Arp2/3 Regulatory System and Its Deregulation in Cancer. Physiol Rev. 2017; 98(1):215-238. DOI: 10.1152/physrev.00006.2017. View

3.
Dayel M, Holleran E, Mullins R . Arp2/3 complex requires hydrolyzable ATP for nucleation of new actin filaments. Proc Natl Acad Sci U S A. 2001; 98(26):14871-6. PMC: 64951. DOI: 10.1073/pnas.261419298. View

4.
Dayel M, Mullins R . Activation of Arp2/3 complex: addition of the first subunit of the new filament by a WASP protein triggers rapid ATP hydrolysis on Arp2. PLoS Biol. 2004; 2(4):E91. PMC: 387265. DOI: 10.1371/journal.pbio.0020091. View

5.
Ingerman E, Hsiao J, Mullins R . Arp2/3 complex ATP hydrolysis promotes lamellipodial actin network disassembly but is dispensable for assembly. J Cell Biol. 2013; 200(5):619-33. PMC: 3587832. DOI: 10.1083/jcb.201211069. View