» Articles » PMID: 38418897

Development of a Promising PPAR Signaling Pathway-related Prognostic Prediction Model for Hepatocellular Carcinoma

Overview
Journal Sci Rep
Specialty Science
Date 2024 Feb 28
PMID 38418897
Authors
Affiliations
Soon will be listed here.
Abstract

The peroxisome proliferator-activated receptor (PPAR) signaling pathway plays a crucial role in systemic cell metabolism, energy homeostasis and immune response inhibition. However, its significance in hepatocellular carcinoma (HCC) has not been well documented. In our study, based on the RNA sequencing data of HCC, consensus clustering analyses were performed to identify PPAR signaling pathway-related molecular subtypes, each of which displaying varying survival probabilities and immune infiltration status. Following, a prognostic prediction model of HCC was developed by using the random survival forest method and Cox regression analysis. Significant difference in survival outcome, immune landscape, drug sensitivity and pathological features were observed between patients with different prognosis. Additionally, decision tree and nomogram models were adopted to optimize the prognostic prediction model. Furthermore, the robustness of the model was verified through single-cell RNA-sequencing data. Collectively, this study systematically elucidated that the PPAR signaling pathway-related prognostic model has good predictive efficacy for patients with HCC. These findings provide valuable insights for further research on personalized treatment approaches for HCC.

Citing Articles

Transcriptomic analysis of broiler chickens reveals metabolic adaptations to a reduced crude protein diet.

Asiamah C, de Las Heras-Saldana S, Musigwa S, Kheravii S, Wu S Poult Sci. 2025; 104(4):104920.

PMID: 39983527 PMC: 11889961. DOI: 10.1016/j.psj.2025.104920.


Transcriptome and chromatin accessibility landscape of ovarian development at different egg-laying stages in taihe black-bone silky fowls.

Zhang J, Cui Y, Ruan J, Zhu H, Liang H, Cao J Poult Sci. 2025; 104(3):104864.

PMID: 39922133 PMC: 11851220. DOI: 10.1016/j.psj.2025.104864.


LC-MS profiling and cytotoxic activity of Angiopteris helferiana against HepG2 cell line: Molecular insight to investigate anticancer agent.

Pandey B, Thapa S, Biradar M, Singh B, Ghale J, Kharel P PLoS One. 2024; 19(12):e0309797.

PMID: 39739862 PMC: 11687663. DOI: 10.1371/journal.pone.0309797.


Comprehensive RNA-Seq Gene Co-Expression Analysis Reveals Consistent Molecular Pathways in Hepatocellular Carcinoma across Diverse Risk Factors.

Talubo N, Tsai P, Tayo L Biology (Basel). 2024; 13(10).

PMID: 39452074 PMC: 11505157. DOI: 10.3390/biology13100765.


Constructing the dynamic transcriptional regulatory networks to identify phenotype-specific transcription regulators.

Guo Y, Xiao Z Brief Bioinform. 2024; 25(6).

PMID: 39451156 PMC: 11503644. DOI: 10.1093/bib/bbae542.


References
1.
Arnold M, Abnet C, Neale R, Vignat J, Giovannucci E, McGlynn K . Global Burden of 5 Major Types of Gastrointestinal Cancer. Gastroenterology. 2020; 159(1):335-349.e15. PMC: 8630546. DOI: 10.1053/j.gastro.2020.02.068. View

2.
Wagner N, Wagner K . The Role of PPARs in Disease. Cells. 2020; 9(11). PMC: 7692109. DOI: 10.3390/cells9112367. View

3.
Rotman N, Wahli W . PPAR modulation of kinase-linked receptor signaling in physiology and disease. Physiology (Bethesda). 2010; 25(3):176-85. DOI: 10.1152/physiol.00018.2010. View

4.
Semple R, Chatterjee V, ORahilly S . PPAR gamma and human metabolic disease. J Clin Invest. 2006; 116(3):581-9. PMC: 1386124. DOI: 10.1172/JCI28003. View

5.
Grabacka M, Pierzchalska M, Plonka P, Pierzchalski P . The Role of PPAR Alpha in the Modulation of Innate Immunity. Int J Mol Sci. 2021; 22(19). PMC: 8508635. DOI: 10.3390/ijms221910545. View