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MACE: Automated Assessment of Stereochemistry of Transition Metal Complexes and Its Applications in Computational Catalysis

Overview
Specialties Biochemistry
Chemistry
Date 2024 Feb 16
PMID 38365199
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Abstract

Computational chemistry pipelines typically commence with geometry generation, well-established for organic compounds but presenting a considerable challenge for transition metal complexes. This paper introduces MACE, an automated computational workflow for converting chemist SMILES/MOL representations of the ligands and the metal center to 3D coordinates for all feasible stereochemical configurations for mononuclear octahedral and square planar complexes directly suitable for quantum chemical computations and implementation in high-throughput computational chemistry workflows. The workflow is validated through a structural screening of a data set of transition metal complexes extracted from the Cambridge Structural Database. To further illustrate the power and capabilities of MACE, we present the results of a model DFT study on the hemilability of pincer ligands in Ru, Fe, and Mn complexes, which highlights the utility of the workflow for both focused mechanistic studies and larger-scale high-throughput pipelines.

Citing Articles

Partial to Total Generation of 3D Transition-Metal Complexes.

Jin H, Merz Jr K J Chem Theory Comput. 2024; .

PMID: 39251343 PMC: 11428130. DOI: 10.1021/acs.jctc.4c00775.

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