» Articles » PMID: 38213323

Multiple Labeling of Compartmentalized Cortical Neurons in Microfluidic Chambers

Overview
Journal Bio Protoc
Specialty Biology
Date 2024 Jan 12
PMID 38213323
Authors
Affiliations
Soon will be listed here.
Abstract

Neurons are complex cells with two distinct compartments: the somatodendritic and the axonal domains. Because of their polarized morphology, it is challenging to study the differential cellular and molecular mechanisms that occur in axons and impact the soma and dendrites using conventional in vitro culture systems. Compartmentalized cultures offer a solution by physically and chemically separating the axonal from the somatodendritic domain of neurons. The microfluidic chamber model presented in this work is valuable for studying these mechanisms in primary cortical cultures derived from rat and mouse. In addition, this chamber model is compatible with various microscopy methods, such as phase contrast, and fluorescence imaging of living and fixed cells. Key features • Preparation and attachment of PDMS microfluidic chambers to glass coverslips. • Primary culture of cortical neurons and plating cortical neurons in microfluidic chamber. • Confirmation of compartmentalization using the retrograde transport of the fluorescently labeled form of cholera toxin subunit B (f-Ctb). • Immunofluorescence and multilabeling of compartmentalized cortical neurons. • Retrograde transport of fluorescently labeled BDNF.

Citing Articles

PLC-γ-Ca pathway regulates axonal TrkB endocytosis and is required for long-distance propagation of BDNF signaling.

Moya-Alvarado G, Valero-Pena X, Aguirre-Soto A, Bustos F, Lazo O, Bronfman F Front Mol Neurosci. 2024; 17:1009404.

PMID: 38660384 PMC: 11040097. DOI: 10.3389/fnmol.2024.1009404.

References
1.
Yamashita N, Kuruvilla R . Neurotrophin signaling endosomes: biogenesis, regulation, and functions. Curr Opin Neurobiol. 2016; 39:139-45. PMC: 4987223. DOI: 10.1016/j.conb.2016.06.004. View

2.
Kaech S, Banker G . Culturing hippocampal neurons. Nat Protoc. 2007; 1(5):2406-15. DOI: 10.1038/nprot.2006.356. View

3.
Stuardo N, Moya-Alvarado G, Ramirez C, Schiavo G, Bronfman F . An Improved Protocol to Purify and Directly Mono-Biotinylate Recombinant BDNF in a Tube for Cellular Trafficking Studies in Neurons. J Vis Exp. 2020; (161). DOI: 10.3791/61262. View

4.
Panayotis N, Karpova A, Kreutz M, Fainzilber M . Macromolecular transport in synapse to nucleus communication. Trends Neurosci. 2014; 38(2):108-16. DOI: 10.1016/j.tins.2014.12.001. View

5.
Moya-Alvarado G, Tiburcio-Felix R, Ibanez M, Aguirre-Soto A, Guerra M, Wu C . BDNF/TrkB signaling endosomes in axons coordinate CREB/mTOR activation and protein synthesis in the cell body to induce dendritic growth in cortical neurons. Elife. 2023; 12. PMC: 9977295. DOI: 10.7554/eLife.77455. View