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Genome-Wide Analysis of the MADS-Box Gene Family in and Their Role in Floral Organ Development

Overview
Journal Int J Mol Sci
Publisher MDPI
Date 2024 Jan 11
PMID 38203576
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Abstract

belongs to the Malvaceae family, and is a plant with medicinal, edible, and greening values. MADS-box transcription factor is a large family of regulatory factors involved in a variety of biological processes in plants. Here, we performed a genome-wide characterization of MADS-box proteins in and investigated gene structure, phylogenetics, -acting elements, three-dimensional structure, gene expression, and protein interaction to identify candidate MADS-box genes that mediate petal developmental regulation in . A total of 163 candidate MADS-box genes were found and classified into type I (Mα, Mβ, and Mγ) and type II (MIKC and M). Analysis of -acting elements in the promoter region showed that most elements were correlated to plant hormones. The analysis of nine expressions of two different cultivars showed that they were differentially expressed between two type flowers. The analysis of protein interaction networks also indicated that MADS proteins played a crucial role in floral organ identification, inflorescence and fruit development, and flowering time. This research is the first to analyze the MADS-box family of and provides an important reference for further study of the biological functions of the MADS-box, especially in flower organ development.

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References
1.
Castelan-Munoz N, Herrera J, Cajero-Sanchez W, Arrizubieta M, Trejo C, Garcia-Ponce B . MADS-Box Genes Are Key Components of Genetic Regulatory Networks Involved in Abiotic Stress and Plastic Developmental Responses in Plants. Front Plant Sci. 2019; 10:853. PMC: 6636334. DOI: 10.3389/fpls.2019.00853. View

2.
de Bodt S, Theissen G, Van de Peer Y . Promoter analysis of MADS-box genes in eudicots through phylogenetic footprinting. Mol Biol Evol. 2006; 23(6):1293-303. DOI: 10.1093/molbev/msk016. View

3.
Mousavian Z, Khodabandeh M, Sharifi-Zarchi A, Nadafian A, Mahmoudi A . StrongestPath: a Cytoscape application for protein-protein interaction analysis. BMC Bioinformatics. 2021; 22(1):352. PMC: 8244221. DOI: 10.1186/s12859-021-04230-4. View

4.
Ng M, Yanofsky M . Function and evolution of the plant MADS-box gene family. Nat Rev Genet. 2001; 2(3):186-95. DOI: 10.1038/35056041. View

5.
Joseph J, Poolakkalody N, Shah J . Plant reference genes for development and stress response studies. J Biosci. 2018; 43(1):173-187. View