» Articles » PMID: 38179914

Draft Whole-genome Sequences of Three Isolates from Western Canada

Overview
Authors
Affiliations
Soon will be listed here.
Abstract

Whole-genome sequences are presented for three , a causative agent of Lyme disease in North America, isolated from ticks collected in British Columbia, Canada. Shotgun DNA libraries were prepared with Illumina DNA Prep and sequenced using the MiniSeq platform. Genome assemblies enabled multilocus sequence typing and typing.

Citing Articles

Whole-genome sequencing of Western Canadian spp. collected from diverse tick and animal hosts reveals short-lived local genotypes interspersed with longer-lived continental genotypes.

Russell J, Lee M, Uyaguari-Diaz M, Sies A, Suchan D, Hsiao W Microb Genom. 2024; 10(8).

PMID: 39093316 PMC: 11296321. DOI: 10.1099/mgen.0.001276.

References
1.
Marques A, Strle F, Wormser G . Comparison of Lyme Disease in the United States and Europe. Emerg Infect Dis. 2021; 27(8):2017-2024. PMC: 8314816. DOI: 10.3201/eid2708.204763. View

2.
Ogden N, Lindsay L, Morshed M, Sockett P, Artsob H . The emergence of Lyme disease in Canada. CMAJ. 2009; 180(12):1221-4. PMC: 2691438. DOI: 10.1503/cmaj.080148. View

3.
Olson R, Assaf R, Brettin T, Conrad N, Cucinell C, Davis J . Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR. Nucleic Acids Res. 2022; 51(D1):D678-D689. PMC: 9825582. DOI: 10.1093/nar/gkac1003. View

4.
Bouchard C, Leonard E, Koffi J, Pelcat Y, Peregrine A, Chilton N . The increasing risk of Lyme disease in Canada. Can Vet J. 2015; 56(7):693-9. PMC: 4466818. View

5.
Parks D, Imelfort M, Skennerton C, Hugenholtz P, Tyson G . CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes. Genome Res. 2015; 25(7):1043-55. PMC: 4484387. DOI: 10.1101/gr.186072.114. View