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Application of Novel PACS-based Informatics Platform to Identify Imaging Based Predictors of CDKN2A Allelic Status in Glioblastomas

Abstract

Gliomas with CDKN2A mutations are known to have worse prognosis but imaging features of these gliomas are unknown. Our goal is to identify CDKN2A specific qualitative imaging biomarkers in glioblastomas using a new informatics workflow that enables rapid analysis of qualitative imaging features with Visually AcceSAble Rembrandtr Images (VASARI) for large datasets in PACS. Sixty nine patients undergoing GBM resection with CDKN2A status determined by whole-exome sequencing were included. GBMs on magnetic resonance images were automatically 3D segmented using deep learning algorithms incorporated within PACS. VASARI features were assessed using FHIR forms integrated within PACS. GBMs without CDKN2A alterations were significantly larger (64 vs. 30%, p = 0.007) compared to tumors with homozygous deletion (HOMDEL) and heterozygous loss (HETLOSS). Lesions larger than 8 cm were four times more likely to have no CDKN2A alteration (OR: 4.3; 95% CI 1.5-12.1; p < 0.001). We developed a novel integrated PACS informatics platform for the assessment of GBM molecular subtypes and show that tumors with HOMDEL are more likely to have radiographic evidence of pial invasion and less likely to have deep white matter invasion or subependymal invasion. These imaging features may allow noninvasive identification of CDKN2A allele status.

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References
1.
Lu V, OConnor K, Shah A, Eichberg D, Luther E, Komotar R . The prognostic significance of CDKN2A homozygous deletion in IDH-mutant lower-grade glioma and glioblastoma: a systematic review of the contemporary literature. J Neurooncol. 2020; 148(2):221-229. DOI: 10.1007/s11060-020-03528-2. View

2.
Petersen G, Bousabarah K, Verma T, von Reppert M, Jekel L, Gordem A . Real-time PACS-integrated longitudinal brain metastasis tracking tool provides comprehensive assessment of treatment response to radiosurgery. Neurooncol Adv. 2022; 4(1):vdac116. PMC: 9412827. DOI: 10.1093/noajnl/vdac116. View

3.
Verhaak R, Hoadley K, Purdom E, Wang V, Qi Y, Wilkerson M . Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1. Cancer Cell. 2010; 17(1):98-110. PMC: 2818769. DOI: 10.1016/j.ccr.2009.12.020. View

4.
Velazquez E, Meier R, Dunn Jr W, Alexander B, Wiest R, Bauer S . Fully automatic GBM segmentation in the TCGA-GBM dataset: Prognosis and correlation with VASARI features. Sci Rep. 2015; 5:16822. PMC: 4649540. DOI: 10.1038/srep16822. View

5.
Parker N, Khong P, Parkinson J, Howell V, Wheeler H . Molecular heterogeneity in glioblastoma: potential clinical implications. Front Oncol. 2015; 5:55. PMC: 4347445. DOI: 10.3389/fonc.2015.00055. View