» Articles » PMID: 38036336

Hypoxia Inducible Factor Pathway Proteins in High-altitude Mammals

Overview
Specialty Biochemistry
Date 2023 Nov 30
PMID 38036336
Authors
Affiliations
Soon will be listed here.
Abstract

Humans and other mammals inhabit hypoxic high-altitude locales. In many of these species, genes under positive selection include ones in the Hypoxia Inducible Factor (HIF) pathway. One is PHD2 (EGLN1), which encodes for a key oxygen sensor. Another is HIF2A (EPAS1), which encodes for a PHD2-regulated transcription factor. Recent studies have provided insights into mechanisms for these high-altitude alleles. These studies have (i) shown that selection can occur on nonconserved, unstructured regions of proteins, (ii) revealed that high altitude-associated amino acid substitutions can have differential effects on protein-protein interactions, (iii) provided evidence for convergent evolution by different molecular mechanisms, and (iv) suggested that mutations in different genes can complement one another to produce a set of adaptive phenotypes.

Citing Articles

Variations and Hematological Adaptations to High-Altitude Hypoxia in Indigenous Goats in Yunnan Province, China.

Zhu L, Tang L, Zhao Y, Li S, Gou X, Deng W Animals (Basel). 2025; 15(5).

PMID: 40075980 PMC: 11899464. DOI: 10.3390/ani15050695.


Whole-genome relaxed selection and molecular constraints in Triplophysa under adapted Qinghai-Tibetan Plateau.

Zhao Q, Xie F, He Q, Wang L, Guo K, Zhang C BMC Genomics. 2025; 26(1):123.

PMID: 39924476 PMC: 11808961. DOI: 10.1186/s12864-025-11290-w.


Regulation of PHD2 by HIF-1α in Erythroid Cells: Insights into Erythropoiesis Under Hypoxia.

Wang S, Xu Q, Liu W, Zhang N, Qi Y, Tang F Int J Mol Sci. 2025; 26(2.

PMID: 39859474 PMC: 11765976. DOI: 10.3390/ijms26020762.


Four new genome sequences of the Pallas's cat (): an insight into the patterns of within-species variability.

Bubenikova J, Plasil M, Burger P, Horin P Front Genet. 2024; 15:1463774.

PMID: 39720181 PMC: 11667119. DOI: 10.3389/fgene.2024.1463774.


Comparative DNA methylation reveals epigenetic adaptation to high altitude in snub-nosed monkeys.

Wang L, Liu W, Du J, Li M, Wu R, Li M Zool Res. 2024; 45(5):1013-1026.

PMID: 39147716 PMC: 11491775. DOI: 10.24272/j.issn.2095-8137.2024.050.

References
1.
Brutsaert T, Kiyamu M, Revollendo G, Isherwood J, Lee F, Rivera-Ch M . Association of gene with high aerobic capacity of Peruvian Quechua at high altitude. Proc Natl Acad Sci U S A. 2019; 116(48):24006-24011. PMC: 6883775. DOI: 10.1073/pnas.1906171116. View

2.
Natarajan C, Inoguchi N, Weber R, Fago A, Moriyama H, Storz J . Epistasis among adaptive mutations in deer mouse hemoglobin. Science. 2013; 340(6138):1324-7. PMC: 4409680. DOI: 10.1126/science.1236862. View

3.
Gou X, Wang Z, Li N, Qiu F, Xu Z, Yan D . Whole-genome sequencing of six dog breeds from continuous altitudes reveals adaptation to high-altitude hypoxia. Genome Res. 2014; 24(8):1308-15. PMC: 4120084. DOI: 10.1101/gr.171876.113. View

4.
Chen N, Cai Y, Chen Q, Li R, Wang K, Huang Y . Whole-genome resequencing reveals world-wide ancestry and adaptive introgression events of domesticated cattle in East Asia. Nat Commun. 2018; 9(1):2337. PMC: 6002414. DOI: 10.1038/s41467-018-04737-0. View

5.
Tashi T, Reading N, Wuren T, Zhang X, Moore L, Hu H . Gain-of-function EGLN1 prolyl hydroxylase (PHD2 D4E:C127S) in combination with EPAS1 (HIF-2α) polymorphism lowers hemoglobin concentration in Tibetan highlanders. J Mol Med (Berl). 2017; 95(6):665-670. DOI: 10.1007/s00109-017-1519-3. View