» Articles » PMID: 37961502

Turn-On Protein Switches for Controlling Actin Binding in Cells

Overview
Journal bioRxiv
Date 2023 Nov 14
PMID 37961502
Authors
Affiliations
Soon will be listed here.
Abstract

Within a shared cytoplasm, filamentous actin (F-actin) plays numerous and critical roles across the cell body. Cells rely on actin-binding proteins (ABPs) to organize F-actin and to integrate its polymeric characteristics into diverse cellular processes. Yet, the multitude of ABPs that engage with and shape F-actin make studying a single ABP's influence on cellular activities a significant challenge. Moreover, without a means of manipulating actin-binding subcellularly, harnessing the F-actin cytoskeleton for synthetic biology purposes remains elusive. Here, we describe a suite of designed proteins, Controllable Actin-binding Switch Tools (CASTs), whose actin-binding behavior can be controlled with external stimuli. CASTs were developed that respond to different external inputs, providing options for turn-on kinetics and enabling orthogonality. Being genetically encoded, we show that CASTs can be inserted into native protein sequences to control F-actin association locally and engineered into new structures to control cell and tissue shape and behavior.

References
1.
Borowiak M, Kullmer F, Gegenfurtner F, Peil S, Nasufovic V, Zahler S . Optical Manipulation of F-Actin with Photoswitchable Small Molecules. J Am Chem Soc. 2020; 142(20):9240-9249. PMC: 8023282. DOI: 10.1021/jacs.9b12898. View

2.
Peterson J, Mitchison T . Small molecules, big impact: a history of chemical inhibitors and the cytoskeleton. Chem Biol. 2002; 9(12):1275-85. DOI: 10.1016/s1074-5521(02)00284-3. View

3.
Harris A, Belardi B, Jreij P, Wei K, Shams H, Bausch A . Steric regulation of tandem calponin homology domain actin-binding affinity. Mol Biol Cell. 2019; 30(26):3112-3122. PMC: 6938246. DOI: 10.1091/mbc.E19-06-0317. View

4.
Lungu O, Hallett R, Choi E, Aiken M, Hahn K, Kuhlman B . Designing photoswitchable peptides using the AsLOV2 domain. Chem Biol. 2012; 19(4):507-17. PMC: 3334866. DOI: 10.1016/j.chembiol.2012.02.006. View

5.
Zhou H . Quantitative relation between intermolecular and intramolecular binding of pro-rich peptides to SH3 domains. Biophys J. 2006; 91(9):3170-81. PMC: 1614496. DOI: 10.1529/biophysj.106.090258. View